Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
XPAP23025 SNORD113.3-201ENST00000364630 78 ntBASIC1.42□□□□□ -2.18
XPAP23025 SNORD115-35-201ENST00000365122 82 ntBASIC1.42□□□□□ -2.18
XPAP23025 RNU6-949P-201ENST00000384040 107 ntBASIC1.42□□□□□ -2.18
XPAP23025 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
XPAP23025 RNU6-1321P-201ENST00000390905 107 ntBASIC1.42□□□□□ -2.18
XPAP23025 U8.15-201ENST00000390947 134 ntBASIC1.42□□□□□ -2.18
XPAP23025 RNU6-679P-201ENST00000391003 106 ntBASIC1.42□□□□□ -2.18
XPAP23025 AC096949.1-201ENST00000412047 152 ntBASIC1.42□□□□□ -2.18
XPAP23025 RNU7-2P-201ENST00000516096 62 ntBASIC1.42□□□□□ -2.18
XPAP23025 snoU13.31-201ENST00000607291 104 ntBASIC1.42□□□□□ -2.18
XPAP23025 RNU6-94P-201ENST00000607728 107 ntBASIC1.42□□□□□ -2.18
XPAP23025 MIR450A1-201ENST00000362262 91 ntBASIC1.41□□□□□ -2.18
XPAP23025 RNU6-153P-201ENST00000364422 104 ntBASIC1.41□□□□□ -2.18
XPAP23025 Y_RNA.507-201ENST00000384500 99 ntBASIC1.41□□□□□ -2.18
XPAP23025 MIR1912-201ENST00000410389 80 ntBASIC1.41□□□□□ -2.18
XPAP23025 SNORA19.1-201ENST00000410656 129 ntBASIC1.41□□□□□ -2.18
XPAP23025 SNORD83.1-201ENST00000411362 77 ntBASIC1.41□□□□□ -2.18
XPAP23025 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
XPAP23025 AL157834.3-201ENST00000615543 103 ntBASIC1.41□□□□□ -2.18
XPAP23025 SNORD114-10-201ENST00000363409 72 ntBASIC1.4□□□□□ -2.19
XPAP23025 Y_RNA.163-201ENST00000363702 113 ntBASIC1.4□□□□□ -2.19
XPAP23025 RNU6-409P-201ENST00000384114 104 ntBASIC1.4□□□□□ -2.19
XPAP23025 Y_RNA.448-201ENST00000384185 108 ntBASIC1.4□□□□□ -2.19
XPAP23025 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
XPAP23025 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
XPAP23025 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
XPAP23025 SNORA4-201ENST00000584302 138 ntBASIC1.4□□□□□ -2.19
XPAP23025 AC106800.4-201ENST00000614905 153 ntBASIC1.4□□□□□ -2.19
XPAP23025 AC012676.2-201ENST00000619258 186 ntBASIC1.4□□□□□ -2.19
XPAP23025 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
XPAP23025 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
XPAP23025 Y_RNA.360-201ENST00000365512 102 ntBASIC1.39□□□□□ -2.19
XPAP23025 RNU6-147P-201ENST00000383983 107 ntBASIC1.39□□□□□ -2.19
XPAP23025 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
XPAP23025 RNU6-733P-201ENST00000410759 104 ntBASIC1.39□□□□□ -2.19
XPAP23025 MRPL35P3-201ENST00000421557 364 ntBASIC1.39□□□□□ -2.19
XPAP23025 UBL5P1-201ENST00000507979 193 ntBASIC1.39□□□□□ -2.19
XPAP23025 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
XPAP23025 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
XPAP23025 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
XPAP23025 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.38□□□□□ -2.19
XPAP23025 RNU7-90P-201ENST00000459216 62 ntBASIC1.38□□□□□ -2.19
XPAP23025 MIR4498-201ENST00000577599 66 ntBASIC1.38□□□□□ -2.19
XPAP23025 MIR3613-201ENST00000579844 87 ntBASIC1.38□□□□□ -2.19
XPAP23025 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
XPAP23025 MIR577-201ENST00000385196 96 ntBASIC1.37□□□□□ -2.19
XPAP23025 MT-TF-201ENST00000387314 71 ntBASIC1.37□□□□□ -2.19
XPAP23025 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.37□□□□□ -2.19
XPAP23025 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
XPAP23025 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
XPAP23025 RNU6-1053P-201ENST00000515930 101 ntBASIC1.37□□□□□ -2.19
XPAP23025 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
XPAP23025 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.37□□□□□ -2.19
XPAP23025 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.37□□□□□ -2.19
XPAP23025 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
XPAP23025 Y_RNA.247-201ENST00000364500 92 ntBASIC1.36□□□□□ -2.19
XPAP23025 RNU6-934P-201ENST00000365154 107 ntBASIC1.36□□□□□ -2.19
XPAP23025 MIR34C-201ENST00000384831 77 ntBASIC1.36□□□□□ -2.19
XPAP23025 SNORD111-201ENST00000408139 94 ntBASIC1.36□□□□□ -2.19
XPAP23025 AL031737.1-201ENST00000450125 223 ntBASIC1.36□□□□□ -2.19
XPAP23025 MIR18B-201ENST00000454574 71 ntBASIC1.36□□□□□ -2.19
XPAP23025 MIR4781-201ENST00000585250 76 ntBASIC1.36□□□□□ -2.19
XPAP23025 MIR376B-201ENST00000614515 100 ntBASIC1.36□□□□□ -2.19
XPAP23025 AC023934.1-201ENST00000574529 2389 ntBASIC1.35□□□□□ -2.19
XPAP23025 Y_RNA.328-201ENST00000365208 113 ntBASIC1.35□□□□□ -2.19
XPAP23025 RNU6-756P-201ENST00000383997 107 ntBASIC1.35□□□□□ -2.19
XPAP23025 SNORA51.5-201ENST00000384126 131 ntBASIC1.35□□□□□ -2.19
XPAP23025 MIR1302-5-201ENST00000408164 150 ntBASIC1.35□□□□□ -2.19
XPAP23025 RNU7-48P-201ENST00000458875 63 ntBASIC1.35□□□□□ -2.19
XPAP23025 AC141557.1-201ENST00000540982 400 ntBASIC1.35□□□□□ -2.19
XPAP23025 MIR4771-2-201ENST00000577758 74 ntBASIC1.35□□□□□ -2.19
XPAP23025 MIR4771-1-201ENST00000582617 74 ntBASIC1.35□□□□□ -2.19
XPAP23025 AC020891.4-201ENST00000605745 93 ntBASIC1.35□□□□□ -2.19
XPAP23025 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
XPAP23025 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
XPAP23025 AL512310.12-203ENST00000640543 90 ntBASIC1.35□□□□□ -2.19
XPAP23025 RNU6-369P-201ENST00000362515 102 ntBASIC1.34□□□□□ -2.19
XPAP23025 RNU6-1099P-201ENST00000363533 107 ntBASIC1.34□□□□□ -2.19
XPAP23025 RNU1-36P-201ENST00000365130 165 ntBASIC1.34□□□□□ -2.19
XPAP23025 RNU6-1201P-201ENST00000384227 107 ntBASIC1.34□□□□□ -2.19
XPAP23025 MIR590-201ENST00000385008 97 ntBASIC1.34□□□□□ -2.19
XPAP23025 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
XPAP23025 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
XPAP23025 RNU7-185P-201ENST00000459215 60 ntBASIC1.34□□□□□ -2.19
XPAP23025 AC138749.4-201ENST00000563970 127 ntBASIC1.34□□□□□ -2.19
XPAP23025 AC133485.1-201ENST00000567176 124 ntBASIC1.34□□□□□ -2.19
XPAP23025 RNU6-1313P-201ENST00000362622 102 ntBASIC1.33□□□□□ -2.2
XPAP23025 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
XPAP23025 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
XPAP23025 SNORD93-201ENST00000408813 74 ntBASIC1.33□□□□□ -2.2
XPAP23025 MTATP6P29-201ENST00000415057 132 ntBASIC1.33□□□□□ -2.2
XPAP23025 RNU6-1006P-201ENST00000516998 103 ntBASIC1.33□□□□□ -2.2
XPAP23025 MIR4491-201ENST00000581087 68 ntBASIC1.33□□□□□ -2.2
XPAP23025 AL359821.1-201ENST00000605519 182 ntBASIC1.33□□□□□ -2.2
XPAP23025 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
XPAP23025 U6.109-201ENST00000636749 87 ntBASIC1.33□□□□□ -2.2
XPAP23025 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
XPAP23025 RNU6-832P-201ENST00000363319 107 ntBASIC1.32□□□□□ -2.2
XPAP23025 RNA5SP133-201ENST00000363368 119 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms