Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.5□□□□□ -2.33
COL5A1P20908 Y_RNA.71-201ENST00000362892 104 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 Y_RNA.168-201ENST00000363740 102 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 RNU6-654P-201ENST00000364373 107 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 RNU4-16P-201ENST00000364737 141 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 Y_RNA.440-201ENST00000384120 114 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 MIR200A-201ENST00000384875 90 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 SNORD89-201ENST00000390981 114 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 SNORD37.2-201ENST00000391075 66 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 RNU6-257P-201ENST00000410238 98 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 AC063976.4-201ENST00000421971 163 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 RNU6-1258P-201ENST00000516911 111 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.49□□□□□ -2.33
COL5A1P20908 MIR3910-1-201ENST00000580936 111 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
COL5A1P20908 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COL5A1P20908 MIR377-201ENST00000362145 69 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU6-774P-201ENST00000363238 107 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.120-201ENST00000363304 110 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.346-201ENST00000365385 112 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 MIR539-201ENST00000365690 78 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 SNORA51.10-201ENST00000384418 136 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.521-201ENST00000384560 114 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 MT-TF-201ENST00000387314 71 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU6-205P-201ENST00000390858 107 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU6-1321P-201ENST00000390905 107 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU6-913P-201ENST00000390913 95 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNA5SP25-201ENST00000410815 110 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 MIR18B-201ENST00000454574 71 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU7-21P-201ENST00000459430 62 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU2-35P-201ENST00000516446 142 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNY4P20-201ENST00000516678 93 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU6-1149P-201ENST00000516810 97 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 SNORA70.22-201ENST00000517160 124 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.757-201ENST00000578934 114 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNU4-67P-201ENST00000364569 141 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.470-201ENST00000384307 117 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 SNORD99-201ENST00000408612 74 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.630-201ENST00000411370 108 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 Y_RNA.690-201ENST00000516603 95 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 RNA5SP33-201ENST00000516687 98 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.48□□□□□ -2.33
COL5A1P20908 AL670379.3-201ENST00000605040 251 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 TUG1_4.1-201ENST00000619464 181 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 AC021613.1-201ENST00000623880 111 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 MIR376A2-201ENST00000636782 80 ntBASIC0.48□□□□□ -2.33
COL5A1P20908 AL391516.1-201ENST00000554380 2449 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 Y_RNA.49-201ENST00000362714 112 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 RNU6-915P-201ENST00000364943 103 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 RNU6-22P-201ENST00000384355 107 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 RNU6-1168P-201ENST00000390831 104 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 RNA5SP95-201ENST00000410319 137 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 MIR1270-201ENST00000459320 83 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 MIR4802-201ENST00000581881 80 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 MIR6717-201ENST00000622747 73 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 MIR6516-201ENST00000630554 81 ntBASIC0.47□□□□□ -2.33
COL5A1P20908 MIR329-2-201ENST00000385029 84 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 MIR563-201ENST00000385080 79 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNA5SP144-201ENST00000410846 116 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNU6-1086P-201ENST00000410930 100 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNU7-62P-201ENST00000458856 62 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNU6-772P-201ENST00000516042 105 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNU6-346P-201ENST00000516288 111 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNA5SP255-201ENST00000516370 107 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNU7-40P-201ENST00000516397 64 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 RNU7-53P-201ENST00000516705 60 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 MIR4804-201ENST00000581683 73 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 MIR4661-201ENST00000582720 75 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 MIR3133-201ENST00000583157 78 ntBASIC0.46□□□□□ -2.34
COL5A1P20908 SNORD115-2-201ENST00000362842 82 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNY1P13-201ENST00000365030 105 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 SNORD115-20-201ENST00000365099 82 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
COL5A1P20908 Y_RNA.525-201ENST00000384570 113 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 MT-TI-201ENST00000387365 69 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 MIR759-201ENST00000390224 91 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 AL603908.1-201ENST00000406098 201 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNA5SP136-201ENST00000410906 107 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 Y_RNA.651-201ENST00000459380 103 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU6-977P-201ENST00000516411 103 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU6-1018P-201ENST00000516577 106 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 AP001328.1-201ENST00000528550 176 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 AC019288.1-201ENST00000557918 224 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 MTND5P34-201ENST00000568888 325 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 uc_338.6-201ENST00000613544 171 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 RNU6-934P-201ENST00000365154 107 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 SNORA18-201ENST00000384416 132 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 Y_RNA.528-201ENST00000384575 108 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 Y_RNA.563-201ENST00000384707 108 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 SNORA19-201ENST00000384737 128 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 MIR125B2-201ENST00000385128 89 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 MIR569-201ENST00000385228 96 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
COL5A1P20908 MIR942-201ENST00000401111 86 ntBASIC0.45□□□□□ -2.34
COL5A1P20908 AL512326.2-201ENST00000426359 151 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms