Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MIR548AO-201ENST00000579992 96 ntBASIC1.67□□□□□ -2.14
KRT4P19013 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
KRT4P19013 AC105081.1-201ENST00000617727 106 ntBASIC1.67□□□□□ -2.14
KRT4P19013 AC012676.2-201ENST00000619258 186 ntBASIC1.67□□□□□ -2.14
KRT4P19013 MIR8063-201ENST00000621930 81 ntBASIC1.67□□□□□ -2.14
KRT4P19013 AP001362.1-201ENST00000625165 124 ntBASIC1.67□□□□□ -2.14
KRT4P19013 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRT4P19013 RNY1P13-201ENST00000365030 105 ntBASIC1.66□□□□□ -2.14
KRT4P19013 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
KRT4P19013 SNORA59A-201ENST00000459326 152 ntBASIC1.66□□□□□ -2.14
KRT4P19013 RNU6-652P-201ENST00000365488 107 ntBASIC1.65□□□□□ -2.15
KRT4P19013 RNU6-1237P-201ENST00000384777 107 ntBASIC1.65□□□□□ -2.15
KRT4P19013 MIR194-1-201ENST00000384892 85 ntBASIC1.65□□□□□ -2.15
KRT4P19013 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.65□□□□□ -2.15
KRT4P19013 RNA5SP237-201ENST00000410414 113 ntBASIC1.65□□□□□ -2.15
KRT4P19013 AC004965.1-201ENST00000413033 213 ntBASIC1.65□□□□□ -2.15
KRT4P19013 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
KRT4P19013 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.65□□□□□ -2.15
KRT4P19013 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
KRT4P19013 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
KRT4P19013 MIR4662A-201ENST00000637499 67 ntBASIC1.65□□□□□ -2.15
KRT4P19013 HSBP1P2-201ENST00000299671 229 ntBASIC1.64□□□□□ -2.15
KRT4P19013 RNU6-203P-201ENST00000384038 104 ntBASIC1.64□□□□□ -2.15
KRT4P19013 AC133485.1-201ENST00000567176 124 ntBASIC1.64□□□□□ -2.15
KRT4P19013 AC141846.1-201ENST00000568348 142 ntBASIC1.64□□□□□ -2.15
KRT4P19013 AL513043.2-201ENST00000573941 143 ntBASIC1.64□□□□□ -2.15
KRT4P19013 AL662814.1-201ENST00000617364 121 ntBASIC1.64□□□□□ -2.15
KRT4P19013 RNA5SP48-201ENST00000363969 126 ntBASIC1.63□□□□□ -2.15
KRT4P19013 MIR181B2-201ENST00000385004 89 ntBASIC1.63□□□□□ -2.15
KRT4P19013 MIR519C-201ENST00000385053 87 ntBASIC1.63□□□□□ -2.15
KRT4P19013 RNU6-613P-201ENST00000410412 108 ntBASIC1.63□□□□□ -2.15
KRT4P19013 RNU7-41P-201ENST00000515917 61 ntBASIC1.63□□□□□ -2.15
KRT4P19013 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
KRT4P19013 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRT4P19013 Y_RNA.168-201ENST00000363740 102 ntBASIC1.62□□□□□ -2.15
KRT4P19013 RNY1P2-201ENST00000364820 117 ntBASIC1.62□□□□□ -2.15
KRT4P19013 Y_RNA.316-201ENST00000365118 111 ntBASIC1.62□□□□□ -2.15
KRT4P19013 RNU6-949P-201ENST00000384040 107 ntBASIC1.62□□□□□ -2.15
KRT4P19013 AC009474.2-201ENST00000451383 136 ntBASIC1.62□□□□□ -2.15
KRT4P19013 AC093729.1-201ENST00000513074 128 ntBASIC1.62□□□□□ -2.15
KRT4P19013 AP000753.3-201ENST00000604083 169 ntBASIC1.62□□□□□ -2.15
KRT4P19013 MIR6852-201ENST00000621699 66 ntBASIC1.62□□□□□ -2.15
KRT4P19013 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
KRT4P19013 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
KRT4P19013 SNORD115-37-201ENST00000363768 82 ntBASIC1.61□□□□□ -2.15
KRT4P19013 SNORA2B-201ENST00000384583 137 ntBASIC1.61□□□□□ -2.15
KRT4P19013 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
KRT4P19013 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
KRT4P19013 RNU6-955P-201ENST00000410497 104 ntBASIC1.61□□□□□ -2.15
KRT4P19013 AC027119.1-201ENST00000440877 241 ntBASIC1.61□□□□□ -2.15
KRT4P19013 UBE2DNL-203ENST00000474922 222 ntBASIC1.61□□□□□ -2.15
KRT4P19013 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
KRT4P19013 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.61□□□□□ -2.15
KRT4P19013 MIR449A-201ENST00000362113 91 ntBASIC1.6□□□□□ -2.15
KRT4P19013 SNORD115-27-201ENST00000364430 82 ntBASIC1.6□□□□□ -2.15
KRT4P19013 RNA5SP259-201ENST00000365541 109 ntBASIC1.6□□□□□ -2.15
KRT4P19013 RNU6-524P-201ENST00000384270 107 ntBASIC1.6□□□□□ -2.15
KRT4P19013 RNA5SP508-201ENST00000411327 119 ntBASIC1.6□□□□□ -2.15
KRT4P19013 AL161935.2-201ENST00000414627 60 ntBASIC1.6□□□□□ -2.15
KRT4P19013 snoU13.2-201ENST00000459201 104 ntBASIC1.6□□□□□ -2.15
KRT4P19013 SNORD111.1-201ENST00000516421 86 ntBASIC1.6□□□□□ -2.15
KRT4P19013 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
KRT4P19013 AL357312.1-201ENST00000603879 298 ntBASIC1.6□□□□□ -2.15
KRT4P19013 MIR8066-201ENST00000617280 78 ntBASIC1.6□□□□□ -2.15
KRT4P19013 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRT4P19013 RNA5SP133-201ENST00000363368 119 ntBASIC1.59□□□□□ -2.15
KRT4P19013 RNU6-776P-201ENST00000364403 104 ntBASIC1.59□□□□□ -2.15
KRT4P19013 RNU6-1022P-201ENST00000365049 104 ntBASIC1.59□□□□□ -2.15
KRT4P19013 MIR513A1-201ENST00000385138 129 ntBASIC1.59□□□□□ -2.15
KRT4P19013 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KRT4P19013 RNU6-519P-201ENST00000410590 108 ntBASIC1.59□□□□□ -2.15
KRT4P19013 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.59□□□□□ -2.15
KRT4P19013 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
KRT4P19013 MIR4648-201ENST00000580107 72 ntBASIC1.59□□□□□ -2.15
KRT4P19013 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRT4P19013 AC244023.1-201ENST00000426884 112 ntBASIC1.58□□□□□ -2.16
KRT4P19013 MIR4435-1-201ENST00000582552 80 ntBASIC1.58□□□□□ -2.16
KRT4P19013 AC242498.1-201ENST00000604134 111 ntBASIC1.58□□□□□ -2.16
KRT4P19013 PRELID3BP2-201ENST00000605362 201 ntBASIC1.58□□□□□ -2.16
KRT4P19013 AC020891.4-201ENST00000605745 93 ntBASIC1.58□□□□□ -2.16
KRT4P19013 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRT4P19013 Y_RNA.94-201ENST00000363068 106 ntBASIC1.57□□□□□ -2.16
KRT4P19013 RNU6-396P-201ENST00000365369 105 ntBASIC1.57□□□□□ -2.16
KRT4P19013 MIR563-201ENST00000385080 79 ntBASIC1.57□□□□□ -2.16
KRT4P19013 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
KRT4P19013 SNORD41-201ENST00000386967 70 ntBASIC1.57□□□□□ -2.16
KRT4P19013 AC073261.1-201ENST00000429409 121 ntBASIC1.57□□□□□ -2.16
KRT4P19013 AC019176.1-201ENST00000518519 225 ntBASIC1.57□□□□□ -2.16
KRT4P19013 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
KRT4P19013 AC140658.3-201ENST00000567603 271 ntBASIC1.57□□□□□ -2.16
KRT4P19013 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
KRT4P19013 MIR583-201ENST00000384846 75 ntBASIC1.56□□□□□ -2.16
KRT4P19013 MIR588-201ENST00000384900 83 ntBASIC1.56□□□□□ -2.16
KRT4P19013 MIR1236-201ENST00000408340 102 ntBASIC1.56□□□□□ -2.16
KRT4P19013 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.56□□□□□ -2.16
KRT4P19013 AC087499.7-201ENST00000441958 109 ntBASIC1.56□□□□□ -2.16
KRT4P19013 SNRPGP12-201ENST00000449481 213 ntBASIC1.56□□□□□ -2.16
KRT4P19013 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
KRT4P19013 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
KRT4P19013 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms