Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNA5SP237-201ENST00000410414 113 ntBASIC2.13□□□□□ -2.07
LIG1P18858 snoU13.2-201ENST00000459201 104 ntBASIC2.13□□□□□ -2.07
LIG1P18858 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
LIG1P18858 MIR4524B-201ENST00000581569 115 ntBASIC2.13□□□□□ -2.07
LIG1P18858 MIR4668-201ENST00000582284 70 ntBASIC2.13□□□□□ -2.07
LIG1P18858 AP000942.3-201ENST00000603702 160 ntBASIC2.13□□□□□ -2.07
LIG1P18858 GHRLOS.1-201ENST00000610995 70 ntBASIC2.13□□□□□ -2.07
LIG1P18858 AP001362.1-201ENST00000625165 124 ntBASIC2.13□□□□□ -2.07
LIG1P18858 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LIG1P18858 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LIG1P18858 RNU6-1244P-201ENST00000363614 108 ntBASIC2.12□□□□□ -2.07
LIG1P18858 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
LIG1P18858 MIR583-201ENST00000384846 75 ntBASIC2.12□□□□□ -2.07
LIG1P18858 MIR1302-7-201ENST00000408841 72 ntBASIC2.12□□□□□ -2.07
LIG1P18858 Y_RNA.620-201ENST00000411009 88 ntBASIC2.12□□□□□ -2.07
LIG1P18858 RPL39P39-201ENST00000455840 151 ntBASIC2.12□□□□□ -2.07
LIG1P18858 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
LIG1P18858 RNA5SP445-201ENST00000515889 115 ntBASIC2.12□□□□□ -2.07
LIG1P18858 RNU6-237P-201ENST00000515985 71 ntBASIC2.12□□□□□ -2.07
LIG1P18858 RNU6-922P-201ENST00000516753 99 ntBASIC2.12□□□□□ -2.07
LIG1P18858 AL096861.1-201ENST00000610899 123 ntBASIC2.12□□□□□ -2.07
LIG1P18858 MIR3202-2-201ENST00000635980 79 ntBASIC2.12□□□□□ -2.07
LIG1P18858 WWP1P1-201ENST00000466609 2769 ntBASIC2.12□□□□□ -2.07
LIG1P18858 SNORD48-201ENST00000364953 64 ntBASIC2.11□□□□□ -2.07
LIG1P18858 RNU6-1276P-201ENST00000365372 104 ntBASIC2.11□□□□□ -2.07
LIG1P18858 RNU6-979P-201ENST00000383896 107 ntBASIC2.11□□□□□ -2.07
LIG1P18858 RNU6-949P-201ENST00000384040 107 ntBASIC2.11□□□□□ -2.07
LIG1P18858 RNU6-242P-201ENST00000384359 107 ntBASIC2.11□□□□□ -2.07
LIG1P18858 HSPE1P24-201ENST00000450782 238 ntBASIC2.11□□□□□ -2.07
LIG1P18858 Y_RNA.73-201ENST00000362910 113 ntBASIC2.1□□□□□ -2.07
LIG1P18858 MIR563-201ENST00000385080 79 ntBASIC2.1□□□□□ -2.07
LIG1P18858 RNU6-267P-201ENST00000516714 103 ntBASIC2.1□□□□□ -2.07
LIG1P18858 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.1□□□□□ -2.07
LIG1P18858 AC012676.2-201ENST00000619258 186 ntBASIC2.1□□□□□ -2.07
LIG1P18858 RNY1P2-201ENST00000364820 117 ntBASIC2.09□□□□□ -2.07
LIG1P18858 RNU6-497P-201ENST00000365316 104 ntBASIC2.09□□□□□ -2.07
LIG1P18858 RNU6-396P-201ENST00000365369 105 ntBASIC2.09□□□□□ -2.07
LIG1P18858 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LIG1P18858 SPINT5P-201ENST00000448174 155 ntBASIC2.09□□□□□ -2.07
LIG1P18858 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
LIG1P18858 AC133485.1-201ENST00000567176 124 ntBASIC2.09□□□□□ -2.07
LIG1P18858 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.07
LIG1P18858 MIR5588-201ENST00000581890 63 ntBASIC2.09□□□□□ -2.07
LIG1P18858 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
LIG1P18858 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
LIG1P18858 HSBP1P2-201ENST00000299671 229 ntBASIC2.08□□□□□ -2.08
LIG1P18858 RNY1P4-201ENST00000384595 115 ntBASIC2.08□□□□□ -2.08
LIG1P18858 RNU1-98P-201ENST00000458992 160 ntBASIC2.08□□□□□ -2.08
LIG1P18858 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
LIG1P18858 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.08□□□□□ -2.08
LIG1P18858 RNU6-228P-201ENST00000362700 106 ntBASIC2.07□□□□□ -2.08
LIG1P18858 MT-TN-201ENST00000387400 73 ntBASIC2.07□□□□□ -2.08
LIG1P18858 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
LIG1P18858 AL591806.2-201ENST00000433122 173 ntBASIC2.07□□□□□ -2.08
LIG1P18858 AC027119.1-201ENST00000440877 241 ntBASIC2.07□□□□□ -2.08
LIG1P18858 RNU7-171P-201ENST00000459581 62 ntBASIC2.07□□□□□ -2.08
LIG1P18858 RNA5SP395-201ENST00000516567 118 ntBASIC2.07□□□□□ -2.08
LIG1P18858 AP003716.2-201ENST00000528260 108 ntBASIC2.07□□□□□ -2.08
LIG1P18858 MTND5P40-201ENST00000559945 246 ntBASIC2.07□□□□□ -2.08
LIG1P18858 MIR4264-201ENST00000583520 66 ntBASIC2.07□□□□□ -2.08
LIG1P18858 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
LIG1P18858 RNU6-1125P-201ENST00000363601 107 ntBASIC2.06□□□□□ -2.08
LIG1P18858 RNU6-1124P-201ENST00000384169 107 ntBASIC2.06□□□□□ -2.08
LIG1P18858 RNU6-480P-201ENST00000384332 107 ntBASIC2.06□□□□□ -2.08
LIG1P18858 MIR588-201ENST00000384900 83 ntBASIC2.06□□□□□ -2.08
LIG1P18858 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.06□□□□□ -2.08
LIG1P18858 snoU13.25-201ENST00000458945 104 ntBASIC2.06□□□□□ -2.08
LIG1P18858 AL133373.1-201ENST00000497098 94 ntBASIC2.06□□□□□ -2.08
LIG1P18858 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.05□□□□□ -2.08
LIG1P18858 SNORA2B-201ENST00000384583 137 ntBASIC2.05□□□□□ -2.08
LIG1P18858 U8.13-201ENST00000390842 128 ntBASIC2.05□□□□□ -2.08
LIG1P18858 RNU11-2P-201ENST00000516898 142 ntBASIC2.05□□□□□ -2.08
LIG1P18858 MIR4769-201ENST00000584126 77 ntBASIC2.05□□□□□ -2.08
LIG1P18858 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
LIG1P18858 MIR6740-201ENST00000618268 113 ntBASIC2.05□□□□□ -2.08
LIG1P18858 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LIG1P18858 RNU6-633P-201ENST00000362612 103 ntBASIC2.04□□□□□ -2.08
LIG1P18858 RNU6-509P-201ENST00000363519 107 ntBASIC2.04□□□□□ -2.08
LIG1P18858 RNU6-787P-201ENST00000384032 107 ntBASIC2.04□□□□□ -2.08
LIG1P18858 MIR181B2-201ENST00000385004 89 ntBASIC2.04□□□□□ -2.08
LIG1P18858 AC108210.2-201ENST00000503681 201 ntBASIC2.04□□□□□ -2.08
LIG1P18858 MIR2115-201ENST00000516657 100 ntBASIC2.04□□□□□ -2.08
LIG1P18858 MIR4666B-201ENST00000578142 81 ntBASIC2.04□□□□□ -2.08
LIG1P18858 AP000753.3-201ENST00000604083 169 ntBASIC2.04□□□□□ -2.08
LIG1P18858 MIR30D-201ENST00000362283 70 ntBASIC2.03□□□□□ -2.08
LIG1P18858 SNORA25.3-201ENST00000363205 127 ntBASIC2.03□□□□□ -2.08
LIG1P18858 Y_RNA.168-201ENST00000363740 102 ntBASIC2.03□□□□□ -2.08
LIG1P18858 Y_RNA.426-201ENST00000384068 113 ntBASIC2.03□□□□□ -2.08
LIG1P18858 RNU6-613P-201ENST00000410412 108 ntBASIC2.03□□□□□ -2.08
LIG1P18858 Y_RNA.609-201ENST00000410669 89 ntBASIC2.03□□□□□ -2.08
LIG1P18858 AL161932.1-201ENST00000437408 146 ntBASIC2.03□□□□□ -2.08
LIG1P18858 AL513043.2-201ENST00000573941 143 ntBASIC2.03□□□□□ -2.08
LIG1P18858 SNORA4-201ENST00000584302 138 ntBASIC2.03□□□□□ -2.08
LIG1P18858 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.03□□□□□ -2.08
LIG1P18858 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.03□□□□□ -2.08
LIG1P18858 MIR302D-201ENST00000362275 68 ntBASIC2.02□□□□□ -2.09
LIG1P18858 MIR9-3-201ENST00000385084 90 ntBASIC2.02□□□□□ -2.09
LIG1P18858 MIR1255A-201ENST00000408338 113 ntBASIC2.02□□□□□ -2.09
LIG1P18858 snoU13.23-201ENST00000458863 104 ntBASIC2.02□□□□□ -2.09
LIG1P18858 AC138749.4-201ENST00000563970 127 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms