Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIR513A1-201ENST00000385138 129 ntBASIC2.35□□□□□ -2.03
THBS1P07996 RNU6-587P-201ENST00000391282 106 ntBASIC2.35□□□□□ -2.03
THBS1P07996 RNA5SP450-201ENST00000411206 102 ntBASIC2.35□□□□□ -2.03
THBS1P07996 RNU7-62P-201ENST00000458856 62 ntBASIC2.35□□□□□ -2.03
THBS1P07996 RNU6-75P-201ENST00000515944 104 ntBASIC2.35□□□□□ -2.03
THBS1P07996 RNU6-687P-201ENST00000516443 89 ntBASIC2.35□□□□□ -2.03
THBS1P07996 MIR6740-201ENST00000618268 113 ntBASIC2.35□□□□□ -2.03
THBS1P07996 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
THBS1P07996 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
THBS1P07996 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
THBS1P07996 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
THBS1P07996 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
THBS1P07996 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
THBS1P07996 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
THBS1P07996 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
THBS1P07996 AC074348.1-201ENST00000426503 132 ntBASIC2.34□□□□□ -2.03
THBS1P07996 AC005908.1-201ENST00000468701 347 ntBASIC2.34□□□□□ -2.03
THBS1P07996 RNU1-41P-201ENST00000516161 162 ntBASIC2.34□□□□□ -2.03
THBS1P07996 RNU1-48P-201ENST00000516400 162 ntBASIC2.34□□□□□ -2.03
THBS1P07996 RNU11-2P-201ENST00000516898 142 ntBASIC2.34□□□□□ -2.03
THBS1P07996 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.34□□□□□ -2.03
THBS1P07996 YWHAEP2-201ENST00000580066 112 ntBASIC2.34□□□□□ -2.03
THBS1P07996 YWHAEP3-201ENST00000582767 121 ntBASIC2.34□□□□□ -2.03
THBS1P07996 MIR4484-201ENST00000582855 83 ntBASIC2.34□□□□□ -2.03
THBS1P07996 MIR377-201ENST00000362145 69 ntBASIC2.33□□□□□ -2.04
THBS1P07996 RNY4P3-201ENST00000365254 95 ntBASIC2.33□□□□□ -2.04
THBS1P07996 RNU6-132P-201ENST00000383863 107 ntBASIC2.33□□□□□ -2.04
THBS1P07996 MIR518E-201ENST00000385252 88 ntBASIC2.33□□□□□ -2.04
THBS1P07996 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
THBS1P07996 RPL30P7-201ENST00000479312 323 ntBASIC2.33□□□□□ -2.04
THBS1P07996 RNU6-1194P-201ENST00000516208 104 ntBASIC2.33□□□□□ -2.04
THBS1P07996 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
THBS1P07996 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
THBS1P07996 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
THBS1P07996 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
THBS1P07996 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
THBS1P07996 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
THBS1P07996 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
THBS1P07996 RNA5SP68-201ENST00000363885 119 ntBASIC2.32□□□□□ -2.04
THBS1P07996 Y_RNA.532-201ENST00000384590 113 ntBASIC2.32□□□□□ -2.04
THBS1P07996 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
THBS1P07996 SNORD41-201ENST00000386967 70 ntBASIC2.32□□□□□ -2.04
THBS1P07996 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
THBS1P07996 JTBP1-201ENST00000441314 247 ntBASIC2.32□□□□□ -2.04
THBS1P07996 RN7SL274P-201ENST00000492268 272 ntBASIC2.32□□□□□ -2.04
THBS1P07996 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.32□□□□□ -2.04
THBS1P07996 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
THBS1P07996 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
THBS1P07996 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
THBS1P07996 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
THBS1P07996 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
THBS1P07996 Y_RNA.596-201ENST00000410462 109 ntBASIC2.31□□□□□ -2.04
THBS1P07996 SNORD63B-201ENST00000411005 70 ntBASIC2.31□□□□□ -2.04
THBS1P07996 AL161935.2-201ENST00000414627 60 ntBASIC2.31□□□□□ -2.04
THBS1P07996 GHRLOS.1-201ENST00000610995 70 ntBASIC2.31□□□□□ -2.04
THBS1P07996 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
THBS1P07996 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
THBS1P07996 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
THBS1P07996 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
THBS1P07996 MIR4435-1-201ENST00000582552 80 ntBASIC2.3□□□□□ -2.04
THBS1P07996 MIR3192-201ENST00000584920 77 ntBASIC2.3□□□□□ -2.04
THBS1P07996 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
THBS1P07996 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
THBS1P07996 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.3□□□□□ -2.04
THBS1P07996 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
THBS1P07996 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
THBS1P07996 Y_RNA.12-201ENST00000362393 112 ntBASIC2.29□□□□□ -2.04
THBS1P07996 MIR519A1-201ENST00000385257 85 ntBASIC2.29□□□□□ -2.04
THBS1P07996 SNORD30.1-201ENST00000391309 70 ntBASIC2.29□□□□□ -2.04
THBS1P07996 MIR1302-7-201ENST00000408841 72 ntBASIC2.29□□□□□ -2.04
THBS1P07996 MIR18B-201ENST00000454574 71 ntBASIC2.29□□□□□ -2.04
THBS1P07996 RNU6-922P-201ENST00000516753 99 ntBASIC2.29□□□□□ -2.04
THBS1P07996 SNORA31.25-201ENST00000517242 134 ntBASIC2.29□□□□□ -2.04
THBS1P07996 MIR548H5-201ENST00000580314 60 ntBASIC2.29□□□□□ -2.04
THBS1P07996 MIRLET7F1-201ENST00000362202 87 ntBASIC2.28□□□□□ -2.04
THBS1P07996 SNORA3A-201ENST00000364113 130 ntBASIC2.28□□□□□ -2.04
THBS1P07996 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
THBS1P07996 MIR154-201ENST00000385243 84 ntBASIC2.28□□□□□ -2.04
THBS1P07996 MIR1265-201ENST00000408444 86 ntBASIC2.28□□□□□ -2.04
THBS1P07996 AL161722.3-201ENST00000605789 2983 ntBASIC2.27□□□□□ -2.05
THBS1P07996 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
THBS1P07996 MIR101-2-201ENST00000362195 79 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNU6-681P-201ENST00000364012 104 ntBASIC2.27□□□□□ -2.05
THBS1P07996 Y_RNA.239-201ENST00000364444 113 ntBASIC2.27□□□□□ -2.05
THBS1P07996 SNORA8.1-201ENST00000384250 140 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNU6-205P-201ENST00000390858 107 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNA5SP181-201ENST00000410246 98 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RPS27P16-201ENST00000425758 201 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNU7-106P-201ENST00000459514 67 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNA5SP148-201ENST00000516527 94 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNU6-531P-201ENST00000516694 104 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
THBS1P07996 RNU6-250P-201ENST00000516958 103 ntBASIC2.27□□□□□ -2.05
THBS1P07996 MIR4491-201ENST00000581087 68 ntBASIC2.27□□□□□ -2.05
THBS1P07996 AL359851.1-201ENST00000569460 4997 ntBASIC2.27□□□□□ -2.05
THBS1P07996 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
THBS1P07996 RNU6-957P-201ENST00000363652 99 ntBASIC2.26□□□□□ -2.05
THBS1P07996 MIR942-201ENST00000401111 86 ntBASIC2.26□□□□□ -2.05
THBS1P07996 SNORD93-201ENST00000408813 74 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms