Protein–RNA interactions for Protein: P06401

PGR, Progesterone receptor, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGRP06401 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.93□□□□□ -2.1
PGRP06401 AP001362.1-201ENST00000625165 124 ntBASIC1.93□□□□□ -2.1
PGRP06401 MIR6516-201ENST00000630554 81 ntBASIC1.93□□□□□ -2.1
PGRP06401 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
PGRP06401 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PGRP06401 MIR103A2-201ENST00000362154 78 ntBASIC1.92□□□□□ -2.1
PGRP06401 RNA5SP264-201ENST00000363115 107 ntBASIC1.92□□□□□ -2.1
PGRP06401 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
PGRP06401 RNU6-813P-201ENST00000384691 107 ntBASIC1.92□□□□□ -2.1
PGRP06401 RNU6-205P-201ENST00000390858 107 ntBASIC1.92□□□□□ -2.1
PGRP06401 RPL30P7-201ENST00000479312 323 ntBASIC1.92□□□□□ -2.1
PGRP06401 AC133485.1-201ENST00000567176 124 ntBASIC1.92□□□□□ -2.1
PGRP06401 MIR3937-201ENST00000580135 106 ntBASIC1.92□□□□□ -2.1
PGRP06401 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
PGRP06401 Y_RNA.4-201ENST00000362333 112 ntBASIC1.91□□□□□ -2.1
PGRP06401 Y_RNA.388-201ENST00000383919 113 ntBASIC1.91□□□□□ -2.1
PGRP06401 MIR548G-201ENST00000408442 89 ntBASIC1.91□□□□□ -2.1
PGRP06401 MIR3664-201ENST00000579074 99 ntBASIC1.91□□□□□ -2.1
PGRP06401 AC062037.1-201ENST00000605302 128 ntBASIC1.91□□□□□ -2.1
PGRP06401 RNU6-86P-201ENST00000606534 107 ntBASIC1.91□□□□□ -2.1
PGRP06401 SEPT14P17-201ENST00000617978 177 ntBASIC1.91□□□□□ -2.1
PGRP06401 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PGRP06401 MIR30D-201ENST00000362283 70 ntBASIC1.9□□□□□ -2.11
PGRP06401 SNORD38.2-201ENST00000384470 69 ntBASIC1.9□□□□□ -2.11
PGRP06401 MIR450A2-201ENST00000385022 100 ntBASIC1.9□□□□□ -2.11
PGRP06401 RNU6-1165P-201ENST00000410119 107 ntBASIC1.9□□□□□ -2.11
PGRP06401 RNU6-613P-201ENST00000410412 108 ntBASIC1.9□□□□□ -2.11
PGRP06401 RNU7-62P-201ENST00000458856 62 ntBASIC1.9□□□□□ -2.11
PGRP06401 RNU6-165P-201ENST00000517170 99 ntBASIC1.9□□□□□ -2.11
PGRP06401 SNORA4-201ENST00000584302 138 ntBASIC1.9□□□□□ -2.11
PGRP06401 RNU6-90P-201ENST00000606352 106 ntBASIC1.9□□□□□ -2.11
PGRP06401 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PGRP06401 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PGRP06401 MIR377-201ENST00000362145 69 ntBASIC1.89□□□□□ -2.11
PGRP06401 Y_RNA.164-201ENST00000363709 102 ntBASIC1.89□□□□□ -2.11
PGRP06401 RNY1P2-201ENST00000364820 117 ntBASIC1.89□□□□□ -2.11
PGRP06401 U8.15-201ENST00000390947 134 ntBASIC1.89□□□□□ -2.11
PGRP06401 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
PGRP06401 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
PGRP06401 Y_RNA.168-201ENST00000363740 102 ntBASIC1.88□□□□□ -2.11
PGRP06401 Y_RNA.190-201ENST00000363964 101 ntBASIC1.88□□□□□ -2.11
PGRP06401 RNU6-654P-201ENST00000364373 107 ntBASIC1.88□□□□□ -2.11
PGRP06401 Y_RNA.567-201ENST00000384736 106 ntBASIC1.88□□□□□ -2.11
PGRP06401 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
PGRP06401 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.88□□□□□ -2.11
PGRP06401 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.88□□□□□ -2.11
PGRP06401 AL512310.8-201ENST00000550183 120 ntBASIC1.88□□□□□ -2.11
PGRP06401 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
PGRP06401 AC103810.7-201ENST00000607821 91 ntBASIC1.88□□□□□ -2.11
PGRP06401 uc_338.6-201ENST00000613544 171 ntBASIC1.88□□□□□ -2.11
PGRP06401 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
PGRP06401 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PGRP06401 Y_RNA.17-201ENST00000362433 111 ntBASIC1.87□□□□□ -2.11
PGRP06401 RNU6-1244P-201ENST00000363614 108 ntBASIC1.87□□□□□ -2.11
PGRP06401 SNORD58A-201ENST00000383875 65 ntBASIC1.87□□□□□ -2.11
PGRP06401 Y_RNA.593-201ENST00000410292 98 ntBASIC1.87□□□□□ -2.11
PGRP06401 SPINT5P-201ENST00000448174 155 ntBASIC1.87□□□□□ -2.11
PGRP06401 RN7SKP12-201ENST00000516275 143 ntBASIC1.87□□□□□ -2.11
PGRP06401 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
PGRP06401 AC012676.2-201ENST00000619258 186 ntBASIC1.87□□□□□ -2.11
PGRP06401 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
PGRP06401 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PGRP06401 Y_RNA.173-201ENST00000363776 113 ntBASIC1.86□□□□□ -2.11
PGRP06401 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
PGRP06401 MT-TF-201ENST00000387314 71 ntBASIC1.86□□□□□ -2.11
PGRP06401 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PGRP06401 RNA5SP95-201ENST00000410319 137 ntBASIC1.86□□□□□ -2.11
PGRP06401 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
PGRP06401 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.86□□□□□ -2.11
PGRP06401 MTND5P40-201ENST00000559945 246 ntBASIC1.86□□□□□ -2.11
PGRP06401 AC138749.4-201ENST00000563970 127 ntBASIC1.86□□□□□ -2.11
PGRP06401 MIR219B-201ENST00000637023 88 ntBASIC1.86□□□□□ -2.11
PGRP06401 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PGRP06401 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PGRP06401 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PGRP06401 HSBP1P2-201ENST00000299671 229 ntBASIC1.85□□□□□ -2.11
PGRP06401 SNORD116-10-201ENST00000363791 102 ntBASIC1.85□□□□□ -2.11
PGRP06401 Y_RNA.226-201ENST00000364337 114 ntBASIC1.85□□□□□ -2.11
PGRP06401 RNU6-580P-201ENST00000365159 107 ntBASIC1.85□□□□□ -2.11
PGRP06401 RNU6-820P-201ENST00000384273 107 ntBASIC1.85□□□□□ -2.11
PGRP06401 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
PGRP06401 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
PGRP06401 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PGRP06401 MIR494-201ENST00000349529 81 ntBASIC1.84□□□□□ -2.11
PGRP06401 RNY1P10-201ENST00000363268 113 ntBASIC1.84□□□□□ -2.11
PGRP06401 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PGRP06401 RPS27P16-201ENST00000425758 201 ntBASIC1.84□□□□□ -2.11
PGRP06401 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PGRP06401 RNU6-1053P-201ENST00000515930 101 ntBASIC1.84□□□□□ -2.11
PGRP06401 RNU6-902P-201ENST00000517212 91 ntBASIC1.84□□□□□ -2.11
PGRP06401 RNU6-1054P-201ENST00000411293 104 ntBASIC1.83□□□□□ -2.12
PGRP06401 RNU1-98P-201ENST00000458992 160 ntBASIC1.83□□□□□ -2.12
PGRP06401 MIR4498-201ENST00000577599 66 ntBASIC1.83□□□□□ -2.12
PGRP06401 AC090897.1-201ENST00000580909 226 ntBASIC1.83□□□□□ -2.12
PGRP06401 MIR7111-201ENST00000619751 72 ntBASIC1.83□□□□□ -2.12
PGRP06401 U6.109-201ENST00000636749 87 ntBASIC1.83□□□□□ -2.12
PGRP06401 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PGRP06401 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
PGRP06401 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
PGRP06401 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms