Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORD63B-201ENST00000411005 70 ntBASIC-1.49□□□□□ -2.65
APOEP02649 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.49□□□□□ -2.65
APOEP02649 SNORD116.3-201ENST00000517176 78 ntBASIC-1.49□□□□□ -2.65
APOEP02649 MIR378F-201ENST00000578143 78 ntBASIC-1.49□□□□□ -2.65
APOEP02649 MIR548AE2-201ENST00000583456 67 ntBASIC-1.49□□□□□ -2.65
APOEP02649 AL365205.2-201ENST00000594586 68 ntBASIC-1.49□□□□□ -2.65
APOEP02649 snoU18.1-201ENST00000629629 71 ntBASIC-1.49□□□□□ -2.65
APOEP02649 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.5□□□□□ -2.65
APOEP02649 AL731563.1-201ENST00000442202 214 ntBASIC-1.5□□□□□ -2.65
APOEP02649 snoU13.13-201ENST00000458842 104 ntBASIC-1.5□□□□□ -2.65
APOEP02649 AC082651.2-201ENST00000496833 166 ntBASIC-1.5□□□□□ -2.65
APOEP02649 RNA5SP470-201ENST00000516463 106 ntBASIC-1.5□□□□□ -2.65
APOEP02649 SCARNA15-202ENST00000516881 127 ntBASIC-1.5□□□□□ -2.65
APOEP02649 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.51□□□□□ -2.65
APOEP02649 RNY3P5-201ENST00000384127 102 ntBASIC-1.51□□□□□ -2.65
APOEP02649 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.51□□□□□ -2.65
APOEP02649 MIR548I2-201ENST00000408348 149 ntBASIC-1.51□□□□□ -2.65
APOEP02649 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.51□□□□□ -2.65
APOEP02649 MIR4324-201ENST00000584846 72 ntBASIC-1.51□□□□□ -2.65
APOEP02649 AC011603.4-201ENST00000611325 277 ntBASIC-1.51□□□□□ -2.65
APOEP02649 MIR6738-201ENST00000619620 64 ntBASIC-1.51□□□□□ -2.65
APOEP02649 MIR20A-201ENST00000362279 71 ntBASIC-1.52□□□□□ -2.65
APOEP02649 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.52□□□□□ -2.65
APOEP02649 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.52□□□□□ -2.65
APOEP02649 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.52□□□□□ -2.65
APOEP02649 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.52□□□□□ -2.65
APOEP02649 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.52□□□□□ -2.65
APOEP02649 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.52□□□□□ -2.65
APOEP02649 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.52□□□□□ -2.65
APOEP02649 RNU6-721P-201ENST00000410155 105 ntBASIC-1.52□□□□□ -2.65
APOEP02649 AC098614.3-201ENST00000438957 440 ntBASIC-1.52□□□□□ -2.65
APOEP02649 RNA5SP67-201ENST00000516422 131 ntBASIC-1.52□□□□□ -2.65
APOEP02649 SNORA40.14-201ENST00000516543 86 ntBASIC-1.52□□□□□ -2.65
APOEP02649 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.52□□□□□ -2.65
APOEP02649 RNU4-90P-201ENST00000362773 141 ntBASIC-1.53□□□□□ -2.65
APOEP02649 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.53□□□□□ -2.65
APOEP02649 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.53□□□□□ -2.65
APOEP02649 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.53□□□□□ -2.65
APOEP02649 AL606845.1-201ENST00000404881 255 ntBASIC-1.53□□□□□ -2.65
APOEP02649 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.53□□□□□ -2.65
APOEP02649 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.53□□□□□ -2.65
APOEP02649 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.54□□□□□ -2.66
APOEP02649 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.54□□□□□ -2.66
APOEP02649 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.54□□□□□ -2.66
APOEP02649 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.54□□□□□ -2.66
APOEP02649 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.54□□□□□ -2.66
APOEP02649 RNY1P6-201ENST00000384193 109 ntBASIC-1.54□□□□□ -2.66
APOEP02649 RNU6-24P-201ENST00000384440 107 ntBASIC-1.54□□□□□ -2.66
APOEP02649 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.54□□□□□ -2.66
APOEP02649 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.54□□□□□ -2.66
APOEP02649 SNORA20.3-201ENST00000516880 132 ntBASIC-1.54□□□□□ -2.66
APOEP02649 SNORD58B-201ENST00000607313 66 ntBASIC-1.54□□□□□ -2.66
APOEP02649 MIR376A1-201ENST00000616574 68 ntBASIC-1.54□□□□□ -2.66
APOEP02649 AC104985.2-201ENST00000620598 500 ntBASIC-1.54□□□□□ -2.66
APOEP02649 MTND5P18-201ENST00000445624 1801 ntBASIC-1.54□□□□□ -2.66
APOEP02649 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.55□□□□□ -2.66
APOEP02649 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.55□□□□□ -2.66
APOEP02649 RNU6-559P-201ENST00000516151 98 ntBASIC-1.55□□□□□ -2.66
APOEP02649 RNU6-453P-201ENST00000516819 85 ntBASIC-1.55□□□□□ -2.66
APOEP02649 AC002553.4-201ENST00000616896 331 ntBASIC-1.55□□□□□ -2.66
APOEP02649 AL138825.1-201ENST00000618587 192 ntBASIC-1.55□□□□□ -2.66
APOEP02649 RNU6-170P-201ENST00000362832 104 ntBASIC-1.56□□□□□ -2.66
APOEP02649 SNORD115-44-201ENST00000365391 82 ntBASIC-1.56□□□□□ -2.66
APOEP02649 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.56□□□□□ -2.66
APOEP02649 RNU7-55P-201ENST00000459426 62 ntBASIC-1.56□□□□□ -2.66
APOEP02649 RNU7-106P-201ENST00000459514 67 ntBASIC-1.56□□□□□ -2.66
APOEP02649 RN7SKP19-201ENST00000516016 252 ntBASIC-1.56□□□□□ -2.66
APOEP02649 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.56□□□□□ -2.66
APOEP02649 AC140658.3-201ENST00000567603 271 ntBASIC-1.56□□□□□ -2.66
APOEP02649 MIR3179-1-201ENST00000578940 84 ntBASIC-1.56□□□□□ -2.66
APOEP02649 MIR3179-2-201ENST00000579107 84 ntBASIC-1.56□□□□□ -2.66
APOEP02649 MIR3179-3-201ENST00000579566 84 ntBASIC-1.56□□□□□ -2.66
APOEP02649 MIR3179-4-201ENST00000617599 84 ntBASIC-1.56□□□□□ -2.66
APOEP02649 AL606534.2-204ENST00000635008 178 ntBASIC-1.56□□□□□ -2.66
APOEP02649 SNORA51.5-201ENST00000384126 131 ntBASIC-1.57□□□□□ -2.66
APOEP02649 MT-TY-201ENST00000387409 66 ntBASIC-1.57□□□□□ -2.66
APOEP02649 AC016907.1-201ENST00000419483 435 ntBASIC-1.57□□□□□ -2.66
APOEP02649 RNU7-48P-201ENST00000458875 63 ntBASIC-1.57□□□□□ -2.66
APOEP02649 MIR2113-201ENST00000459007 91 ntBASIC-1.57□□□□□ -2.66
APOEP02649 MIR1270-201ENST00000459320 83 ntBASIC-1.57□□□□□ -2.66
APOEP02649 AC069439.1-201ENST00000494739 167 ntBASIC-1.57□□□□□ -2.66
APOEP02649 RNU6-570P-201ENST00000517051 105 ntBASIC-1.57□□□□□ -2.66
APOEP02649 AC093783.1-201ENST00000612976 329 ntBASIC-1.57□□□□□ -2.66
APOEP02649 MIR409-201ENST00000362237 79 ntBASIC-1.58□□□□□ -2.66
APOEP02649 SNORD81.2-201ENST00000365153 76 ntBASIC-1.58□□□□□ -2.66
APOEP02649 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.58□□□□□ -2.66
APOEP02649 MIR652-201ENST00000385278 98 ntBASIC-1.58□□□□□ -2.66
APOEP02649 AC244090.1-201ENST00000441884 93 ntBASIC-1.58□□□□□ -2.66
APOEP02649 AC145423.2-201ENST00000610631 239 ntBASIC-1.58□□□□□ -2.66
APOEP02649 U4.5-201ENST00000617137 123 ntBASIC-1.58□□□□□ -2.66
APOEP02649 AP000770.2-201ENST00000623694 100 ntBASIC-1.58□□□□□ -2.66
APOEP02649 MTND4LP32-201ENST00000636111 270 ntBASIC-1.58□□□□□ -2.66
APOEP02649 SNORA25.1-201ENST00000362326 128 ntBASIC-1.59□□□□□ -2.66
APOEP02649 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.59□□□□□ -2.66
APOEP02649 MIR518B-201ENST00000385127 83 ntBASIC-1.59□□□□□ -2.66
APOEP02649 SNORA49-201ENST00000386157 136 ntBASIC-1.59□□□□□ -2.66
APOEP02649 SCARNA18B-201ENST00000458806 135 ntBASIC-1.59□□□□□ -2.66
APOEP02649 RNU6-718P-201ENST00000516166 105 ntBASIC-1.59□□□□□ -2.66
APOEP02649 RNU6-561P-201ENST00000516222 102 ntBASIC-1.59□□□□□ -2.66
APOEP02649 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms