Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR6844-201ENST00000637122 62 ntBASIC0.5□□□□□ -2.33
RTN3O95197 Y_RNA.13-201ENST00000362403 112 ntBASIC0.49□□□□□ -2.33
RTN3O95197 Y_RNA.171-201ENST00000363760 102 ntBASIC0.49□□□□□ -2.33
RTN3O95197 Y_RNA.297-201ENST00000364950 91 ntBASIC0.49□□□□□ -2.33
RTN3O95197 RNY1P13-201ENST00000365030 105 ntBASIC0.49□□□□□ -2.33
RTN3O95197 RNU6-35P-201ENST00000384530 107 ntBASIC0.49□□□□□ -2.33
RTN3O95197 Y_RNA.588-201ENST00000391254 102 ntBASIC0.49□□□□□ -2.33
RTN3O95197 MTATP6P21-201ENST00000440681 189 ntBASIC0.49□□□□□ -2.33
RTN3O95197 RNU7-113P-201ENST00000459273 62 ntBASIC0.49□□□□□ -2.33
RTN3O95197 RNU6-1258P-201ENST00000516911 111 ntBASIC0.49□□□□□ -2.33
RTN3O95197 RNU6-1271P-201ENST00000517049 105 ntBASIC0.49□□□□□ -2.33
RTN3O95197 AC022559.1-201ENST00000520905 205 ntBASIC0.49□□□□□ -2.33
RTN3O95197 MIR3646-201ENST00000578301 84 ntBASIC0.49□□□□□ -2.33
RTN3O95197 MIR4491-201ENST00000581087 68 ntBASIC0.49□□□□□ -2.33
RTN3O95197 AC011603.4-201ENST00000611325 277 ntBASIC0.49□□□□□ -2.33
RTN3O95197 RNU6-690P-201ENST00000365242 106 ntBASIC0.48□□□□□ -2.33
RTN3O95197 RNU6-239P-201ENST00000390990 99 ntBASIC0.48□□□□□ -2.33
RTN3O95197 Y_RNA.793-201ENST00000411222 111 ntBASIC0.48□□□□□ -2.33
RTN3O95197 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
RTN3O95197 MIR3678-201ENST00000578455 94 ntBASIC0.48□□□□□ -2.33
RTN3O95197 Y_RNA.280-201ENST00000364765 112 ntBASIC0.47□□□□□ -2.33
RTN3O95197 Y_RNA.552-201ENST00000384665 112 ntBASIC0.47□□□□□ -2.33
RTN3O95197 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
RTN3O95197 AC096949.1-201ENST00000412047 152 ntBASIC0.47□□□□□ -2.33
RTN3O95197 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
RTN3O95197 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
RTN3O95197 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.47□□□□□ -2.33
RTN3O95197 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
RTN3O95197 SNORA72.6-201ENST00000384520 129 ntBASIC0.46□□□□□ -2.34
RTN3O95197 MT-TG-201ENST00000387429 68 ntBASIC0.46□□□□□ -2.34
RTN3O95197 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
RTN3O95197 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
RTN3O95197 RNU7-79P-201ENST00000516082 62 ntBASIC0.46□□□□□ -2.34
RTN3O95197 SNORA25.12-201ENST00000516202 82 ntBASIC0.46□□□□□ -2.34
RTN3O95197 RNU7-35P-201ENST00000517174 62 ntBASIC0.46□□□□□ -2.34
RTN3O95197 AP002392.1-201ENST00000537692 208 ntBASIC0.46□□□□□ -2.34
RTN3O95197 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
RTN3O95197 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.46□□□□□ -2.34
RTN3O95197 SNORD115-2-201ENST00000362842 82 ntBASIC0.45□□□□□ -2.34
RTN3O95197 RNU6-379P-201ENST00000363813 104 ntBASIC0.45□□□□□ -2.34
RTN3O95197 RNU4-84P-201ENST00000364200 139 ntBASIC0.45□□□□□ -2.34
RTN3O95197 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
RTN3O95197 SNORD115-20-201ENST00000365099 82 ntBASIC0.45□□□□□ -2.34
RTN3O95197 Y_RNA.497-201ENST00000384447 98 ntBASIC0.45□□□□□ -2.34
RTN3O95197 Y_RNA.617-201ENST00000410920 90 ntBASIC0.45□□□□□ -2.34
RTN3O95197 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
RTN3O95197 RNA5SP33-201ENST00000516687 98 ntBASIC0.45□□□□□ -2.34
RTN3O95197 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
RTN3O95197 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
RTN3O95197 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
RTN3O95197 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
RTN3O95197 Y_RNA.470-201ENST00000384307 117 ntBASIC0.44□□□□□ -2.34
RTN3O95197 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
RTN3O95197 AC133485.4-201ENST00000561835 220 ntBASIC0.44□□□□□ -2.34
RTN3O95197 MIR4305-201ENST00000583252 102 ntBASIC0.44□□□□□ -2.34
RTN3O95197 Y_RNA.294-201ENST00000364916 102 ntBASIC0.43□□□□□ -2.34
RTN3O95197 RNU6-1318P-201ENST00000365389 103 ntBASIC0.43□□□□□ -2.34
RTN3O95197 Y_RNA.476-201ENST00000384347 108 ntBASIC0.43□□□□□ -2.34
RTN3O95197 Y_RNA.567-201ENST00000384736 106 ntBASIC0.43□□□□□ -2.34
RTN3O95197 RNU6-588P-201ENST00000410281 105 ntBASIC0.43□□□□□ -2.34
RTN3O95197 RNU7-121P-201ENST00000516604 62 ntBASIC0.43□□□□□ -2.34
RTN3O95197 AC078938.1-201ENST00000620993 318 ntBASIC0.43□□□□□ -2.34
RTN3O95197 Y_RNA.120-201ENST00000363304 110 ntBASIC0.42□□□□□ -2.34
RTN3O95197 Y_RNA.240-201ENST00000364469 95 ntBASIC0.42□□□□□ -2.34
RTN3O95197 RNU6-200P-201ENST00000364743 107 ntBASIC0.42□□□□□ -2.34
RTN3O95197 SNORD37.2-201ENST00000391075 66 ntBASIC0.42□□□□□ -2.34
RTN3O95197 AL512326.2-201ENST00000426359 151 ntBASIC0.42□□□□□ -2.34
RTN3O95197 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
RTN3O95197 RNU6-135P-201ENST00000516769 101 ntBASIC0.42□□□□□ -2.34
RTN3O95197 DNAJC19P2-201ENST00000593340 302 ntBASIC0.42□□□□□ -2.34
RTN3O95197 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
RTN3O95197 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
RTN3O95197 SNORD18B-201ENST00000365659 72 ntBASIC0.41□□□□□ -2.34
RTN3O95197 Y_RNA.697-201ENST00000516776 113 ntBASIC0.41□□□□□ -2.34
RTN3O95197 RNU6-388P-201ENST00000517012 105 ntBASIC0.41□□□□□ -2.34
RTN3O95197 RNU6-389P-201ENST00000517048 105 ntBASIC0.41□□□□□ -2.34
RTN3O95197 AC138907.4-201ENST00000570107 226 ntBASIC0.41□□□□□ -2.34
RTN3O95197 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
RTN3O95197 SNORA8.2-201ENST00000384372 139 ntBASIC0.4□□□□□ -2.35
RTN3O95197 Y_RNA.531-201ENST00000384589 121 ntBASIC0.4□□□□□ -2.35
RTN3O95197 Y_RNA.536-201ENST00000384621 113 ntBASIC0.4□□□□□ -2.35
RTN3O95197 RNA5SP63-201ENST00000391225 112 ntBASIC0.4□□□□□ -2.35
RTN3O95197 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.4□□□□□ -2.35
RTN3O95197 RNU7-120P-201ENST00000459334 63 ntBASIC0.4□□□□□ -2.35
RTN3O95197 RNU6-240P-201ENST00000516098 97 ntBASIC0.4□□□□□ -2.35
RTN3O95197 SNORA25.16-201ENST00000516741 121 ntBASIC0.4□□□□□ -2.35
RTN3O95197 Y_RNA.700-201ENST00000516806 100 ntBASIC0.4□□□□□ -2.35
RTN3O95197 AC021443.1-201ENST00000604478 211 ntBASIC0.4□□□□□ -2.35
RTN3O95197 MIR6086-201ENST00000638065 55 ntBASIC0.4□□□□□ -2.35
RTN3O95197 Y_RNA.32-201ENST00000362589 110 ntBASIC0.39□□□□□ -2.35
RTN3O95197 SNORA32-201ENST00000384072 121 ntBASIC0.39□□□□□ -2.35
RTN3O95197 MIR644A-201ENST00000385262 94 ntBASIC0.39□□□□□ -2.35
RTN3O95197 Y_RNA.584-201ENST00000391090 114 ntBASIC0.39□□□□□ -2.35
RTN3O95197 RNU6-138P-201ENST00000515952 107 ntBASIC0.39□□□□□ -2.35
RTN3O95197 RNU6-1194P-201ENST00000516208 104 ntBASIC0.39□□□□□ -2.35
RTN3O95197 RNA5SP285-201ENST00000516619 119 ntBASIC0.39□□□□□ -2.35
RTN3O95197 RNU2-60P-201ENST00000517290 128 ntBASIC0.39□□□□□ -2.35
RTN3O95197 DEFB131E-201ENST00000532329 154 ntBASIC0.39□□□□□ -2.35
RTN3O95197 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.39□□□□□ -2.35
RTN3O95197 AC022523.2-201ENST00000561045 150 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms