Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 RNU7-79P-201ENST00000516082 62 ntBASIC0.18□□□□□ -2.38
SDC3O75056 RNU6-1023P-201ENST00000516137 106 ntBASIC0.18□□□□□ -2.38
SDC3O75056 Y_RNA.681-201ENST00000516445 113 ntBASIC0.18□□□□□ -2.38
SDC3O75056 U6.106-201ENST00000636360 105 ntBASIC0.18□□□□□ -2.38
SDC3O75056 Y_RNA.52-201ENST00000362760 96 ntBASIC0.17□□□□□ -2.38
SDC3O75056 Y_RNA.171-201ENST00000363760 102 ntBASIC0.17□□□□□ -2.38
SDC3O75056 RNU6-291P-201ENST00000384720 107 ntBASIC0.17□□□□□ -2.38
SDC3O75056 RNU6-918P-201ENST00000391219 106 ntBASIC0.17□□□□□ -2.38
SDC3O75056 RNA5SP236-201ENST00000516169 116 ntBASIC0.17□□□□□ -2.38
SDC3O75056 SNORA25.16-201ENST00000516741 121 ntBASIC0.17□□□□□ -2.38
SDC3O75056 RNA5SP268-201ENST00000516828 124 ntBASIC0.17□□□□□ -2.38
SDC3O75056 MTND5P34-201ENST00000568888 325 ntBASIC0.17□□□□□ -2.38
SDC3O75056 MIR3128-201ENST00000581957 66 ntBASIC0.17□□□□□ -2.38
SDC3O75056 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.17□□□□□ -2.38
SDC3O75056 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
SDC3O75056 Y_RNA.280-201ENST00000364765 112 ntBASIC0.16□□□□□ -2.38
SDC3O75056 Y_RNA.521-201ENST00000384560 114 ntBASIC0.16□□□□□ -2.38
SDC3O75056 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
SDC3O75056 RNU6-1045P-201ENST00000516321 107 ntBASIC0.16□□□□□ -2.38
SDC3O75056 SCARNA16.5-201ENST00000517114 183 ntBASIC0.16□□□□□ -2.38
SDC3O75056 RNA5SP47-201ENST00000517230 109 ntBASIC0.16□□□□□ -2.38
SDC3O75056 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.16□□□□□ -2.38
SDC3O75056 MIR4639-201ENST00000584938 69 ntBASIC0.16□□□□□ -2.38
SDC3O75056 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
SDC3O75056 RNU6-535P-201ENST00000384722 107 ntBASIC0.15□□□□□ -2.39
SDC3O75056 AL022718.1-201ENST00000412004 84 ntBASIC0.15□□□□□ -2.39
SDC3O75056 SUMO1P3-201ENST00000439961 304 ntBASIC0.15□□□□□ -2.39
SDC3O75056 RNU7-113P-201ENST00000459273 62 ntBASIC0.15□□□□□ -2.39
SDC3O75056 Y_RNA.680-201ENST00000516441 93 ntBASIC0.15□□□□□ -2.39
SDC3O75056 Y_RNA.697-201ENST00000516776 113 ntBASIC0.15□□□□□ -2.39
SDC3O75056 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
SDC3O75056 MIR3149-201ENST00000584629 83 ntBASIC0.15□□□□□ -2.39
SDC3O75056 U4.1-201ENST00000620349 87 ntBASIC0.15□□□□□ -2.39
SDC3O75056 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
SDC3O75056 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
SDC3O75056 Y_RNA.470-201ENST00000384307 117 ntBASIC0.14□□□□□ -2.39
SDC3O75056 SNORD28-201ENST00000384706 75 ntBASIC0.14□□□□□ -2.39
SDC3O75056 RNU6-111P-201ENST00000517179 105 ntBASIC0.14□□□□□ -2.39
SDC3O75056 AC112693.2-201ENST00000556538 232 ntBASIC0.14□□□□□ -2.39
SDC3O75056 AC011603.4-201ENST00000611325 277 ntBASIC0.14□□□□□ -2.39
SDC3O75056 MIR7107-201ENST00000611489 80 ntBASIC0.14□□□□□ -2.39
SDC3O75056 Y_RNA.60-201ENST00000362831 98 ntBASIC0.13□□□□□ -2.39
SDC3O75056 Y_RNA.120-201ENST00000363304 110 ntBASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-1229P-201ENST00000364295 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-312P-201ENST00000364629 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 SNORA20.1-201ENST00000364790 130 ntBASIC0.13□□□□□ -2.39
SDC3O75056 SNORA32-201ENST00000384072 121 ntBASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-768P-201ENST00000384683 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-848P-201ENST00000515948 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-617P-201ENST00000516147 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-473P-201ENST00000516164 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 RNU6-1049P-201ENST00000516414 107 ntBASIC0.13□□□□□ -2.39
SDC3O75056 AC067863.3-201ENST00000624172 122 ntBASIC0.13□□□□□ -2.39
SDC3O75056 AC091304.10-201ENST00000641554 121 ntBASIC0.13□□□□□ -2.39
SDC3O75056 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
SDC3O75056 RNU4-58P-201ENST00000363192 141 ntBASIC0.12□□□□□ -2.39
SDC3O75056 Y_RNA.162-201ENST00000363683 102 ntBASIC0.12□□□□□ -2.39
SDC3O75056 Y_RNA.447-201ENST00000384184 113 ntBASIC0.12□□□□□ -2.39
SDC3O75056 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
SDC3O75056 AC069271.1-201ENST00000445577 156 ntBASIC0.12□□□□□ -2.39
SDC3O75056 AL118496.2-201ENST00000448300 230 ntBASIC0.12□□□□□ -2.39
SDC3O75056 SCARNA15.1-201ENST00000516384 125 ntBASIC0.12□□□□□ -2.39
SDC3O75056 RNA5SP33-201ENST00000516687 98 ntBASIC0.12□□□□□ -2.39
SDC3O75056 DEFB131E-201ENST00000532329 154 ntBASIC0.12□□□□□ -2.39
SDC3O75056 Y_RNA.193-201ENST00000363979 102 ntBASIC0.11□□□□□ -2.39
SDC3O75056 Y_RNA.200-201ENST00000364018 102 ntBASIC0.11□□□□□ -2.39
SDC3O75056 RNU6-1082P-201ENST00000364574 107 ntBASIC0.11□□□□□ -2.39
SDC3O75056 Y_RNA.357-201ENST00000365487 109 ntBASIC0.11□□□□□ -2.39
SDC3O75056 Y_RNA.476-201ENST00000384347 108 ntBASIC0.11□□□□□ -2.39
SDC3O75056 MIRLET7F2-201ENST00000385277 83 ntBASIC0.11□□□□□ -2.39
SDC3O75056 AC107027.2-201ENST00000512197 115 ntBASIC0.11□□□□□ -2.39
SDC3O75056 RNA5SP227-201ENST00000516184 113 ntBASIC0.11□□□□□ -2.39
SDC3O75056 RNU6-531P-201ENST00000516694 104 ntBASIC0.11□□□□□ -2.39
SDC3O75056 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
SDC3O75056 U6.109-201ENST00000636749 87 ntBASIC0.11□□□□□ -2.39
SDC3O75056 Y_RNA.83-201ENST00000363005 113 ntBASIC0.1□□□□□ -2.39
SDC3O75056 RNA5SP133-201ENST00000363368 119 ntBASIC0.1□□□□□ -2.39
SDC3O75056 SNORA63.5-201ENST00000363548 123 ntBASIC0.1□□□□□ -2.39
SDC3O75056 RNU6-818P-201ENST00000364837 108 ntBASIC0.1□□□□□ -2.39
SDC3O75056 RNU6-702P-201ENST00000364982 107 ntBASIC0.1□□□□□ -2.39
SDC3O75056 Y_RNA.337-201ENST00000365312 102 ntBASIC0.1□□□□□ -2.39
SDC3O75056 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
SDC3O75056 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
SDC3O75056 Y_RNA.531-201ENST00000384589 121 ntBASIC0.1□□□□□ -2.39
SDC3O75056 SNORA75.5-201ENST00000391291 81 ntBASIC0.1□□□□□ -2.39
SDC3O75056 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
SDC3O75056 MTATP6P21-201ENST00000440681 189 ntBASIC0.1□□□□□ -2.39
SDC3O75056 MIR4305-201ENST00000583252 102 ntBASIC0.1□□□□□ -2.39
SDC3O75056 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
SDC3O75056 SNORA42.1-201ENST00000363515 137 ntBASIC0.09□□□□□ -2.4
SDC3O75056 RNU6-1020P-201ENST00000363684 107 ntBASIC0.09□□□□□ -2.4
SDC3O75056 RNA5SP245-201ENST00000364239 121 ntBASIC0.09□□□□□ -2.4
SDC3O75056 RNU6-690P-201ENST00000365242 106 ntBASIC0.09□□□□□ -2.4
SDC3O75056 Y_RNA.366-201ENST00000365540 102 ntBASIC0.09□□□□□ -2.4
SDC3O75056 Y_RNA.423-201ENST00000384057 113 ntBASIC0.09□□□□□ -2.4
SDC3O75056 MTND3P2-201ENST00000438452 342 ntBASIC0.09□□□□□ -2.4
SDC3O75056 RNU7-137P-201ENST00000516788 62 ntBASIC0.09□□□□□ -2.4
SDC3O75056 MIR3646-201ENST00000578301 84 ntBASIC0.09□□□□□ -2.4
SDC3O75056 MIR4503-201ENST00000582187 83 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms