Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR8485-201ENST00000401372 91 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 SCARNA18B-201ENST00000458806 135 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 AC107027.2-201ENST00000512197 115 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 RNA5SP33-201ENST00000516687 98 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 RNU6-706P-201ENST00000517229 104 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.71□□□□□ -2.52
SHOX2O60902 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 RNU6-865P-201ENST00000364772 107 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 SNORA18-201ENST00000384416 132 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.72□□□□□ -2.52
SHOX2O60902 RNA5SP484-201ENST00000458857 111 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
SHOX2O60902 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.72□□□□□ -2.52
SHOX2O60902 MIR6851-201ENST00000617060 67 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 AC091932.4-201ENST00000623386 200 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 AC091912.2-201ENST00000624798 167 ntBASIC-0.72□□□□□ -2.52
SHOX2O60902 SNORA22.1-201ENST00000362701 134 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 RNA5SP133-201ENST00000363368 119 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 MTND4LP30-201ENST00000454092 297 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 RNU6-893P-201ENST00000458841 100 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 RNU6-559P-201ENST00000516151 98 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 RNU6-718P-201ENST00000516166 105 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 RNA5SP153-201ENST00000516498 76 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 AC138207.3-201ENST00000585289 166 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 AL356055.1-201ENST00000602528 446 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 AC113139.1-201ENST00000605049 239 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.73□□□□□ -2.53
SHOX2O60902 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 RNU6-623P-201ENST00000363143 105 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.74□□□□□ -2.53
SHOX2O60902 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.74□□□□□ -2.53
SHOX2O60902 MRPS35P2-201ENST00000508242 191 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.74□□□□□ -2.53
SHOX2O60902 AC105081.1-201ENST00000617727 106 ntBASIC-0.74□□□□□ -2.53
SHOX2O60902 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 MIR548F1-201ENST00000408667 84 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 RNU6-721P-201ENST00000410155 105 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 MIR5197-201ENST00000583721 112 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 AC097639.2-201ENST00000603159 172 ntBASIC-0.75□□□□□ -2.53
SHOX2O60902 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 RNU6-900P-201ENST00000384498 102 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 SNORD56B-201ENST00000384713 71 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 Z83846.1-201ENST00000446798 265 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 AC069439.1-201ENST00000494739 167 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 AC080013.6-201ENST00000606185 215 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 AC007485.1-201ENST00000616755 206 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 AC021613.1-201ENST00000623880 111 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 U6.109-201ENST00000636749 87 ntBASIC-0.76□□□□□ -2.53
SHOX2O60902 RNU6-509P-201ENST00000363519 107 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 RNU1-115P-201ENST00000365329 160 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 SNORD115-44-201ENST00000365391 82 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 RNU4-70P-201ENST00000384579 139 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 MIR626-201ENST00000385032 94 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 SNORA20.3-201ENST00000516880 132 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 AC006006.1-201ENST00000603082 144 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 AL606534.2-204ENST00000635008 178 ntBASIC-0.77□□□□□ -2.53
SHOX2O60902 RNU4-90P-201ENST00000362773 141 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 SNORD113-8-201ENST00000363497 74 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 RNU6-431P-201ENST00000383874 107 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 RNU6-540P-201ENST00000384622 101 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 AL603914.1-201ENST00000401964 204 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 PMCHL1-202ENST00000423102 261 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 RNU7-55P-201ENST00000459426 62 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 RNU7-79P-201ENST00000516082 62 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 RNU7-188P-201ENST00000517063 64 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.78□□□□□ -2.53
SHOX2O60902 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNY1P2-201ENST00000364820 117 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNU6-484P-201ENST00000384016 107 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 AL445193.1-201ENST00000441183 141 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNU6-175P-201ENST00000516896 107 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.79□□□□□ -2.54
SHOX2O60902 RNU7-70P-201ENST00000516941 66 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms