Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 Y_RNA.660-201ENST00000516002 120 ntBASIC1.95□□□□□ -2.1
TRIM13O60858 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM13O60858 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
TRIM13O60858 MIR4251-201ENST00000635819 61 ntBASIC1.95□□□□□ -2.1
TRIM13O60858 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
TRIM13O60858 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM13O60858 Y_RNA.532-201ENST00000384590 113 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 AC027119.1-201ENST00000440877 241 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 RNU6-871P-201ENST00000516122 100 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 RNU6-850P-201ENST00000516934 103 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM13O60858 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
TRIM13O60858 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRIM13O60858 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
TRIM13O60858 RNU6-161P-201ENST00000363051 106 ntBASIC1.93□□□□□ -2.1
TRIM13O60858 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
TRIM13O60858 RNU6-1015P-201ENST00000517121 99 ntBASIC1.93□□□□□ -2.1
TRIM13O60858 AC138749.4-201ENST00000563970 127 ntBASIC1.93□□□□□ -2.1
TRIM13O60858 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
TRIM13O60858 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRIM13O60858 RNU6-571P-201ENST00000384128 107 ntBASIC1.92□□□□□ -2.1
TRIM13O60858 RNA5SP292-201ENST00000390974 118 ntBASIC1.92□□□□□ -2.1
TRIM13O60858 RNU6-1108P-201ENST00000516308 104 ntBASIC1.92□□□□□ -2.1
TRIM13O60858 MIR4500-201ENST00000579472 76 ntBASIC1.92□□□□□ -2.1
TRIM13O60858 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
TRIM13O60858 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM13O60858 RNU6-811P-201ENST00000384069 107 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 SNORA72.6-201ENST00000384520 129 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 MIR520H-201ENST00000385126 88 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRIM13O60858 AL356320.1-201ENST00000429616 163 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 AC008413.1-201ENST00000511864 177 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 RNA5SP445-201ENST00000515889 115 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 RNU7-41P-201ENST00000515917 61 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
TRIM13O60858 SNORA25.9-201ENST00000365087 128 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 MIR1265-201ENST00000408444 86 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM13O60858 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 snoU13.2-201ENST00000459201 104 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 AC125388.1-201ENST00000459631 156 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 RNU6-448P-201ENST00000517052 107 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
TRIM13O60858 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRIM13O60858 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM13O60858 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
TRIM13O60858 RNU6-1123P-201ENST00000362347 106 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 MIR563-201ENST00000385080 79 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 MIR634-201ENST00000385208 97 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 AC244023.1-201ENST00000426884 112 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 MIR4672-201ENST00000583126 81 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 AC242498.1-201ENST00000604134 111 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
TRIM13O60858 U6.109-201ENST00000636749 87 ntBASIC1.89□□□□□ -2.11
TRIM13O60858 AC008163.1-202ENST00000636004 2889 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 Y_RNA.340-201ENST00000365330 92 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 MIR635-201ENST00000384830 98 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 BX276092.1-201ENST00000427368 251 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 RNU6-634P-201ENST00000459134 106 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 RNU6-75P-201ENST00000515944 104 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 RNU6-687P-201ENST00000516443 89 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 SNORA18.5-201ENST00000516616 101 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 MIR3064-201ENST00000581130 66 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 MIR4536-1-201ENST00000583537 88 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 AC104996.3-201ENST00000590718 94 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 MIR1297-201ENST00000637311 77 ntBASIC1.88□□□□□ -2.11
TRIM13O60858 SNORD36A-201ENST00000362874 73 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 Y_RNA.119-201ENST00000363301 96 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 RNU6-132P-201ENST00000383863 107 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 SNORD77.2-201ENST00000391045 68 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 HSPE1P24-201ENST00000450782 238 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 AC023790.1-201ENST00000482174 347 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 RNU6-807P-201ENST00000516805 107 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM13O60858 MIR4484-201ENST00000582855 83 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 AL357312.1-201ENST00000603879 298 ntBASIC1.87□□□□□ -2.11
TRIM13O60858 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM13O60858 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
TRIM13O60858 RNA5SP48-201ENST00000363969 126 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 Y_RNA.283-201ENST00000364798 112 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 Y_RNA.386-201ENST00000383913 105 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 MIR588-201ENST00000384900 83 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 MIR23A-201ENST00000385245 73 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 RNU6-70P-201ENST00000516438 60 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 Y_RNA.681-201ENST00000516445 113 ntBASIC1.86□□□□□ -2.11
TRIM13O60858 MIR1273D-201ENST00000577266 86 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms