Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 Y_RNA.568-201ENST00000384742 113 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 RNU7-35P-201ENST00000517174 62 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 TUG1_4.1-201ENST00000619464 181 ntBASIC1.04□□□□□ -2.24
CTNND1O60716 Y_RNA.299-201ENST00000364973 94 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 SNORD50.2-201ENST00000365465 70 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 MIR520F-201ENST00000384824 87 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 AL603908.1-201ENST00000406098 201 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 SNORD93-201ENST00000408813 74 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 RNU7-56P-201ENST00000458744 62 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
CTNND1O60716 RNY1P13-201ENST00000365030 105 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 SNORA40-201ENST00000388090 126 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 U8.15-201ENST00000390947 134 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 RNU6-257P-201ENST00000410238 98 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 MIR548AE2-201ENST00000583456 67 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
CTNND1O60716 Y_RNA.294-201ENST00000364916 102 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-447P-201ENST00000410293 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-1118P-201ENST00000410382 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-1076P-201ENST00000410397 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-355P-201ENST00000410427 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-791P-201ENST00000410467 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-705P-201ENST00000410601 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-1100P-201ENST00000410691 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-860P-201ENST00000410860 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-1217P-201ENST00000411276 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-785P-201ENST00000411324 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 AC004941.2-201ENST00000427009 228 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 MTND4LP9-201ENST00000427694 174 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 AL158147.1-201ENST00000443970 75 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 RNU7-156P-201ENST00000517214 74 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 FAM71BP1-201ENST00000604431 523 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 U6.90-201ENST00000614007 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 U6.70-201ENST00000620287 104 ntBASIC1.01□□□□□ -2.25
CTNND1O60716 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTNND1O60716 RNU6-704P-201ENST00000364162 103 ntBASIC1□□□□□ -2.25
CTNND1O60716 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CTNND1O60716 SNORA32-201ENST00000384072 121 ntBASIC1□□□□□ -2.25
CTNND1O60716 RNU6-364P-201ENST00000384387 107 ntBASIC1□□□□□ -2.25
CTNND1O60716 Y_RNA.586-201ENST00000391146 98 ntBASIC1□□□□□ -2.25
CTNND1O60716 RNU4-69P-201ENST00000410677 143 ntBASIC1□□□□□ -2.25
CTNND1O60716 RN7SKP19-201ENST00000516016 252 ntBASIC1□□□□□ -2.25
CTNND1O60716 RNY4P20-201ENST00000516678 93 ntBASIC1□□□□□ -2.25
CTNND1O60716 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CTNND1O60716 RNU1-119P-201ENST00000391122 165 ntBASIC0.99□□□□□ -2.25
CTNND1O60716 SNORD92-201ENST00000585078 85 ntBASIC0.99□□□□□ -2.25
CTNND1O60716 Y_RNA.36-201ENST00000362602 112 ntBASIC0.98□□□□□ -2.25
CTNND1O60716 MIR520H-201ENST00000385126 88 ntBASIC0.98□□□□□ -2.25
CTNND1O60716 MIR548M-201ENST00000408260 86 ntBASIC0.98□□□□□ -2.25
CTNND1O60716 IGKV1-22-201ENST00000524313 326 ntBASIC0.98□□□□□ -2.25
CTNND1O60716 RNU4-83P-201ENST00000410863 133 ntBASIC0.97□□□□□ -2.25
CTNND1O60716 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.97□□□□□ -2.25
CTNND1O60716 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 SNORD113-1-201ENST00000365321 69 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 RNU6-81P-201ENST00000365608 104 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 RNA5SP136-201ENST00000410906 107 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 RNU7-102P-201ENST00000458948 62 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 MIR4714-201ENST00000580728 77 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 MIR3910-1-201ENST00000580936 111 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 AL589743.1-201ENST00000551932 2712 ntBASIC0.96□□□□□ -2.26
CTNND1O60716 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CTNND1O60716 Y_RNA.218-201ENST00000364218 104 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 MIR539-201ENST00000365690 78 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 Y_RNA.617-201ENST00000410920 90 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 AC022523.2-201ENST00000561045 150 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 AC011195.1-201ENST00000578177 177 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 MIR4491-201ENST00000581087 68 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 MIR6779-201ENST00000617283 64 ntBASIC0.95□□□□□ -2.26
CTNND1O60716 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.95□□□□□ -2.26
CTNND1O60716 RNU6-403P-201ENST00000363163 104 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 MIR605-201ENST00000385078 83 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 MIR1263-201ENST00000408324 86 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 AC096949.1-201ENST00000412047 152 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
CTNND1O60716 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
CTNND1O60716 SNORD114-10-201ENST00000363409 72 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 MIR573-201ENST00000384964 99 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 MIRLET7F2-201ENST00000385277 83 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 MIR759-201ENST00000390224 91 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 SNORD77B-201ENST00000391112 67 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 PSMC1P5-201ENST00000512850 177 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 RNU6-406P-201ENST00000516470 107 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 AC090897.1-201ENST00000580909 226 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 AC008608.1-201ENST00000603910 127 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 MIR8066-201ENST00000617280 78 ntBASIC0.93□□□□□ -2.26
CTNND1O60716 RNU6-235P-201ENST00000362644 107 ntBASIC0.92□□□□□ -2.26
CTNND1O60716 RNU6-1211P-201ENST00000459179 105 ntBASIC0.92□□□□□ -2.26
CTNND1O60716 MIR1270-201ENST00000459320 83 ntBASIC0.92□□□□□ -2.26
CTNND1O60716 SNORD67.1-201ENST00000516618 108 ntBASIC0.92□□□□□ -2.26
CTNND1O60716 RNU7-137P-201ENST00000516788 62 ntBASIC0.92□□□□□ -2.26
CTNND1O60716 RNU6-971P-201ENST00000516920 106 ntBASIC0.92□□□□□ -2.26
CTNND1O60716 Y_RNA.198-201ENST00000364013 98 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms