Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Y_RNA.785-201ENST00000384290 109 ntBASIC0.4□□□□□ -2.35
SNX3O60493 RNU6-1135P-201ENST00000411083 103 ntBASIC0.4□□□□□ -2.35
SNX3O60493 RNU7-164P-201ENST00000459221 62 ntBASIC0.4□□□□□ -2.35
SNX3O60493 SNORA25.12-201ENST00000516202 82 ntBASIC0.4□□□□□ -2.35
SNX3O60493 Y_RNA.686-201ENST00000516548 134 ntBASIC0.4□□□□□ -2.35
SNX3O60493 MTND5P34-201ENST00000568888 325 ntBASIC0.4□□□□□ -2.35
SNX3O60493 MIR6788-201ENST00000618842 66 ntBASIC0.4□□□□□ -2.35
SNX3O60493 uc_338.16-201ENST00000621804 95 ntBASIC0.4□□□□□ -2.35
SNX3O60493 Y_RNA.32-201ENST00000362589 110 ntBASIC0.39□□□□□ -2.35
SNX3O60493 Y_RNA.567-201ENST00000384736 106 ntBASIC0.39□□□□□ -2.35
SNX3O60493 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
SNX3O60493 Y_RNA.690-201ENST00000516603 95 ntBASIC0.39□□□□□ -2.35
SNX3O60493 SNORA31.14-201ENST00000516728 116 ntBASIC0.39□□□□□ -2.35
SNX3O60493 AC112693.2-201ENST00000556538 232 ntBASIC0.39□□□□□ -2.35
SNX3O60493 MIR4452-201ENST00000583004 71 ntBASIC0.39□□□□□ -2.35
SNX3O60493 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
SNX3O60493 Y_RNA.536-201ENST00000384621 113 ntBASIC0.38□□□□□ -2.35
SNX3O60493 RNU6-291P-201ENST00000384720 107 ntBASIC0.38□□□□□ -2.35
SNX3O60493 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
SNX3O60493 MIR548J-201ENST00000408833 112 ntBASIC0.38□□□□□ -2.35
SNX3O60493 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
SNX3O60493 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
SNX3O60493 RNU7-123P-201ENST00000515911 60 ntBASIC0.38□□□□□ -2.35
SNX3O60493 RNU6-469P-201ENST00000516253 101 ntBASIC0.38□□□□□ -2.35
SNX3O60493 SNORD67.1-201ENST00000516618 108 ntBASIC0.38□□□□□ -2.35
SNX3O60493 Y_RNA.697-201ENST00000516776 113 ntBASIC0.38□□□□□ -2.35
SNX3O60493 AL359881.1-201ENST00000602916 267 ntBASIC0.38□□□□□ -2.35
SNX3O60493 SNORA25.18-201ENST00000607153 114 ntBASIC0.38□□□□□ -2.35
SNX3O60493 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
SNX3O60493 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
SNX3O60493 SNORA25.9-201ENST00000365087 128 ntBASIC0.37□□□□□ -2.35
SNX3O60493 RNU4-11P-201ENST00000365287 132 ntBASIC0.37□□□□□ -2.35
SNX3O60493 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
SNX3O60493 AL603914.1-201ENST00000401964 204 ntBASIC0.37□□□□□ -2.35
SNX3O60493 MIR1270-201ENST00000459320 83 ntBASIC0.37□□□□□ -2.35
SNX3O60493 RNU6-531P-201ENST00000516694 104 ntBASIC0.37□□□□□ -2.35
SNX3O60493 RNU7-137P-201ENST00000516788 62 ntBASIC0.37□□□□□ -2.35
SNX3O60493 DEFB131E-201ENST00000532329 154 ntBASIC0.37□□□□□ -2.35
SNX3O60493 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.37□□□□□ -2.35
SNX3O60493 U6.109-201ENST00000636749 87 ntBASIC0.37□□□□□ -2.35
SNX3O60493 SNORA36.1-201ENST00000363424 132 ntBASIC0.36□□□□□ -2.35
SNX3O60493 Y_RNA.174-201ENST00000363781 105 ntBASIC0.36□□□□□ -2.35
SNX3O60493 Y_RNA.366-201ENST00000365540 102 ntBASIC0.36□□□□□ -2.35
SNX3O60493 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
SNX3O60493 RNU6-535P-201ENST00000384722 107 ntBASIC0.36□□□□□ -2.35
SNX3O60493 MIR151B-201ENST00000584249 96 ntBASIC0.36□□□□□ -2.35
SNX3O60493 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
SNX3O60493 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
SNX3O60493 RNU6-151P-201ENST00000364158 107 ntBASIC0.35□□□□□ -2.35
SNX3O60493 Y_RNA.298-201ENST00000364960 107 ntBASIC0.35□□□□□ -2.35
SNX3O60493 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
SNX3O60493 AC098934.3-201ENST00000430450 190 ntBASIC0.35□□□□□ -2.35
SNX3O60493 AC138749.4-201ENST00000563970 127 ntBASIC0.35□□□□□ -2.35
SNX3O60493 AC105081.1-201ENST00000617727 106 ntBASIC0.35□□□□□ -2.35
SNX3O60493 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.35□□□□□ -2.35
SNX3O60493 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.35□□□□□ -2.35
SNX3O60493 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
SNX3O60493 RNU4-58P-201ENST00000363192 141 ntBASIC0.34□□□□□ -2.36
SNX3O60493 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
SNX3O60493 SNORD114-10-201ENST00000363409 72 ntBASIC0.34□□□□□ -2.36
SNX3O60493 RNU6-1130P-201ENST00000365434 107 ntBASIC0.34□□□□□ -2.36
SNX3O60493 RNU4-69P-201ENST00000410677 143 ntBASIC0.34□□□□□ -2.36
SNX3O60493 RNU7-197P-201ENST00000458836 62 ntBASIC0.34□□□□□ -2.36
SNX3O60493 RNU5E-3P-201ENST00000515913 68 ntBASIC0.34□□□□□ -2.36
SNX3O60493 RNU6-1194P-201ENST00000516208 104 ntBASIC0.34□□□□□ -2.36
SNX3O60493 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.34□□□□□ -2.36
SNX3O60493 MIR5000-201ENST00000577717 103 ntBASIC0.34□□□□□ -2.36
SNX3O60493 AC108081.1-201ENST00000604358 221 ntBASIC0.34□□□□□ -2.36
SNX3O60493 Y_RNA.164-201ENST00000363709 102 ntBASIC0.33□□□□□ -2.36
SNX3O60493 AC022523.2-201ENST00000561045 150 ntBASIC0.33□□□□□ -2.36
SNX3O60493 Y_RNA.778-201ENST00000620203 90 ntBASIC0.33□□□□□ -2.36
SNX3O60493 Y_RNA.299-201ENST00000364973 94 ntBASIC0.32□□□□□ -2.36
SNX3O60493 RNU6-449P-201ENST00000383914 107 ntBASIC0.32□□□□□ -2.36
SNX3O60493 MIR499A-201ENST00000384903 122 ntBASIC0.32□□□□□ -2.36
SNX3O60493 MIR216A-201ENST00000385063 110 ntBASIC0.32□□□□□ -2.36
SNX3O60493 RNU6-460P-201ENST00000391158 108 ntBASIC0.32□□□□□ -2.36
SNX3O60493 RNU6-229P-201ENST00000516614 102 ntBASIC0.32□□□□□ -2.36
SNX3O60493 RNY4P20-201ENST00000516678 93 ntBASIC0.32□□□□□ -2.36
SNX3O60493 AL137067.1-201ENST00000615933 120 ntBASIC0.32□□□□□ -2.36
SNX3O60493 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
SNX3O60493 Y_RNA.119-201ENST00000363301 96 ntBASIC0.31□□□□□ -2.36
SNX3O60493 RNA5SP245-201ENST00000364239 121 ntBASIC0.31□□□□□ -2.36
SNX3O60493 SNORD116-18-201ENST00000383961 92 ntBASIC0.31□□□□□ -2.36
SNX3O60493 Y_RNA.580-201ENST00000391004 95 ntBASIC0.31□□□□□ -2.36
SNX3O60493 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.31□□□□□ -2.36
SNX3O60493 RNU6-394P-201ENST00000410735 107 ntBASIC0.31□□□□□ -2.36
SNX3O60493 RNU6-135P-201ENST00000516769 101 ntBASIC0.31□□□□□ -2.36
SNX3O60493 RNA5SP268-201ENST00000516828 124 ntBASIC0.31□□□□□ -2.36
SNX3O60493 RNU6-182P-201ENST00000516970 105 ntBASIC0.31□□□□□ -2.36
SNX3O60493 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
SNX3O60493 SNORA63.5-201ENST00000363548 123 ntBASIC0.3□□□□□ -2.36
SNX3O60493 RNU6-1104P-201ENST00000384723 104 ntBASIC0.3□□□□□ -2.36
SNX3O60493 SUMO1P3-201ENST00000439961 304 ntBASIC0.3□□□□□ -2.36
SNX3O60493 AC098479.1-201ENST00000609225 154 ntBASIC0.3□□□□□ -2.36
SNX3O60493 MIR101-2-201ENST00000362195 79 ntBASIC0.29□□□□□ -2.36
SNX3O60493 RNU6-1229P-201ENST00000364295 107 ntBASIC0.29□□□□□ -2.36
SNX3O60493 RNU6-915P-201ENST00000364943 103 ntBASIC0.29□□□□□ -2.36
SNX3O60493 RNU6-804P-201ENST00000384286 107 ntBASIC0.29□□□□□ -2.36
SNX3O60493 SNORD28-201ENST00000384706 75 ntBASIC0.29□□□□□ -2.36
SNX3O60493 MIRLET7F2-201ENST00000385277 83 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms