Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNU6-1054P-201ENST00000411293 104 ntBASIC1.75□□□□□ -2.13
SHOXO15266 UBL5P1-201ENST00000507979 193 ntBASIC1.75□□□□□ -2.13
SHOXO15266 RNU6-165P-201ENST00000517170 99 ntBASIC1.75□□□□□ -2.13
SHOXO15266 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.75□□□□□ -2.13
SHOXO15266 Y_RNA.140-201ENST00000363474 103 ntBASIC1.74□□□□□ -2.13
SHOXO15266 RNY1P2-201ENST00000364820 117 ntBASIC1.74□□□□□ -2.13
SHOXO15266 Y_RNA.338-201ENST00000365320 114 ntBASIC1.74□□□□□ -2.13
SHOXO15266 MIR488-201ENST00000365739 83 ntBASIC1.74□□□□□ -2.13
SHOXO15266 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.74□□□□□ -2.13
SHOXO15266 RNU7-61P-201ENST00000515897 61 ntBASIC1.74□□□□□ -2.13
SHOXO15266 SNORA72.7-201ENST00000516349 94 ntBASIC1.74□□□□□ -2.13
SHOXO15266 RNU6-1006P-201ENST00000516998 103 ntBASIC1.74□□□□□ -2.13
SHOXO15266 AL161722.3-201ENST00000605789 2983 ntBASIC1.74□□□□□ -2.13
SHOXO15266 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SHOXO15266 RNU6-644P-201ENST00000391155 98 ntBASIC1.73□□□□□ -2.13
SHOXO15266 RNU6-887P-201ENST00000410660 100 ntBASIC1.73□□□□□ -2.13
SHOXO15266 Z98742.3-201ENST00000418637 326 ntBASIC1.73□□□□□ -2.13
SHOXO15266 RPS27P16-201ENST00000425758 201 ntBASIC1.73□□□□□ -2.13
SHOXO15266 MIR18B-201ENST00000454574 71 ntBASIC1.73□□□□□ -2.13
SHOXO15266 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
SHOXO15266 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
SHOXO15266 RNU6-90P-201ENST00000606352 106 ntBASIC1.73□□□□□ -2.13
SHOXO15266 SEPT14P17-201ENST00000617978 177 ntBASIC1.73□□□□□ -2.13
SHOXO15266 MIR4679-1-201ENST00000637619 75 ntBASIC1.73□□□□□ -2.13
SHOXO15266 MIR30D-201ENST00000362283 70 ntBASIC1.72□□□□□ -2.13
SHOXO15266 RNU6-813P-201ENST00000384691 107 ntBASIC1.72□□□□□ -2.13
SHOXO15266 SNORA3.2-201ENST00000408221 125 ntBASIC1.72□□□□□ -2.13
SHOXO15266 MIR548G-201ENST00000408442 89 ntBASIC1.72□□□□□ -2.13
SHOXO15266 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SHOXO15266 MTND5P40-201ENST00000559945 246 ntBASIC1.72□□□□□ -2.13
SHOXO15266 MIR4777-201ENST00000583710 86 ntBASIC1.72□□□□□ -2.13
SHOXO15266 AC091304.10-201ENST00000641554 121 ntBASIC1.72□□□□□ -2.13
SHOXO15266 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SHOXO15266 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
SHOXO15266 RNU6-654P-201ENST00000364373 107 ntBASIC1.71□□□□□ -2.14
SHOXO15266 RNU6-580P-201ENST00000365159 107 ntBASIC1.71□□□□□ -2.14
SHOXO15266 RNU6-49P-201ENST00000384256 107 ntBASIC1.71□□□□□ -2.14
SHOXO15266 MIR1302-4-201ENST00000408701 150 ntBASIC1.71□□□□□ -2.14
SHOXO15266 SPINT5P-201ENST00000448174 155 ntBASIC1.71□□□□□ -2.14
SHOXO15266 RNU6-844P-201ENST00000517175 102 ntBASIC1.71□□□□□ -2.14
SHOXO15266 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHOXO15266 AC109327.2-201ENST00000448339 378 ntBASIC1.7□□□□□ -2.14
SHOXO15266 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.7□□□□□ -2.14
SHOXO15266 SNORA31.2-201ENST00000516019 134 ntBASIC1.7□□□□□ -2.14
SHOXO15266 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.7□□□□□ -2.14
SHOXO15266 U7.3-201ENST00000616123 62 ntBASIC1.7□□□□□ -2.14
SHOXO15266 Y_RNA.164-201ENST00000363709 102 ntBASIC1.69□□□□□ -2.14
SHOXO15266 Y_RNA.247-201ENST00000364500 92 ntBASIC1.69□□□□□ -2.14
SHOXO15266 RNU6-53P-201ENST00000365367 106 ntBASIC1.69□□□□□ -2.14
SHOXO15266 SNORA2B-201ENST00000384583 137 ntBASIC1.69□□□□□ -2.14
SHOXO15266 Y_RNA.567-201ENST00000384736 106 ntBASIC1.69□□□□□ -2.14
SHOXO15266 AC012676.2-201ENST00000619258 186 ntBASIC1.69□□□□□ -2.14
SHOXO15266 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
SHOXO15266 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.69□□□□□ -2.14
SHOXO15266 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHOXO15266 HSBP1P2-201ENST00000299671 229 ntBASIC1.68□□□□□ -2.14
SHOXO15266 MIR337-201ENST00000362281 93 ntBASIC1.68□□□□□ -2.14
SHOXO15266 Y_RNA.290-201ENST00000364879 114 ntBASIC1.68□□□□□ -2.14
SHOXO15266 Y_RNA.330-201ENST00000365230 109 ntBASIC1.68□□□□□ -2.14
SHOXO15266 Y_RNA.467-201ENST00000384297 102 ntBASIC1.68□□□□□ -2.14
SHOXO15266 AC048334.1-201ENST00000477975 159 ntBASIC1.68□□□□□ -2.14
SHOXO15266 MIR548Z-201ENST00000584743 97 ntBASIC1.68□□□□□ -2.14
SHOXO15266 U6.109-201ENST00000636749 87 ntBASIC1.68□□□□□ -2.14
SHOXO15266 SNORD116-10-201ENST00000363791 102 ntBASIC1.67□□□□□ -2.14
SHOXO15266 RNA5SP99-201ENST00000364020 114 ntBASIC1.67□□□□□ -2.14
SHOXO15266 SNORD113.3-201ENST00000364630 78 ntBASIC1.67□□□□□ -2.14
SHOXO15266 RNU6-1134P-201ENST00000365156 101 ntBASIC1.67□□□□□ -2.14
SHOXO15266 RNY1P7-201ENST00000384743 110 ntBASIC1.67□□□□□ -2.14
SHOXO15266 U8.15-201ENST00000390947 134 ntBASIC1.67□□□□□ -2.14
SHOXO15266 RNA5SP95-201ENST00000410319 137 ntBASIC1.67□□□□□ -2.14
SHOXO15266 AL591704.2-201ENST00000421658 181 ntBASIC1.67□□□□□ -2.14
SHOXO15266 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.67□□□□□ -2.14
SHOXO15266 AC138749.4-201ENST00000563970 127 ntBASIC1.67□□□□□ -2.14
SHOXO15266 MIR1273D-201ENST00000577266 86 ntBASIC1.67□□□□□ -2.14
SHOXO15266 RNA5SP133-201ENST00000363368 119 ntBASIC1.66□□□□□ -2.14
SHOXO15266 RNU6-1125P-201ENST00000363601 107 ntBASIC1.66□□□□□ -2.14
SHOXO15266 RNU6-1163P-201ENST00000364516 107 ntBASIC1.66□□□□□ -2.14
SHOXO15266 RNU6-480P-201ENST00000384332 107 ntBASIC1.66□□□□□ -2.14
SHOXO15266 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.66□□□□□ -2.14
SHOXO15266 RNU6-86P-201ENST00000606534 107 ntBASIC1.66□□□□□ -2.14
SHOXO15266 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
SHOXO15266 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.14
SHOXO15266 RNU6-1244P-201ENST00000363614 108 ntBASIC1.65□□□□□ -2.15
SHOXO15266 SNORA80D-201ENST00000384488 135 ntBASIC1.65□□□□□ -2.15
SHOXO15266 SNORD111-201ENST00000408139 94 ntBASIC1.65□□□□□ -2.15
SHOXO15266 SNORD93-201ENST00000408813 74 ntBASIC1.65□□□□□ -2.15
SHOXO15266 RNU6-162P-201ENST00000516228 103 ntBASIC1.65□□□□□ -2.15
SHOXO15266 AC026421.1-201ENST00000519101 163 ntBASIC1.65□□□□□ -2.15
SHOXO15266 SNORD114-1-201ENST00000362705 72 ntBASIC1.64□□□□□ -2.15
SHOXO15266 Y_RNA.173-201ENST00000363776 113 ntBASIC1.64□□□□□ -2.15
SHOXO15266 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
SHOXO15266 MIR1289-2-201ENST00000408360 111 ntBASIC1.64□□□□□ -2.15
SHOXO15266 MIR1257-201ENST00000408490 117 ntBASIC1.64□□□□□ -2.15
SHOXO15266 RN7SKP223-201ENST00000410582 62 ntBASIC1.64□□□□□ -2.15
SHOXO15266 AL603825.1-201ENST00000438481 80 ntBASIC1.64□□□□□ -2.15
SHOXO15266 AC090897.1-201ENST00000580909 226 ntBASIC1.64□□□□□ -2.15
SHOXO15266 AC103810.7-201ENST00000607821 91 ntBASIC1.64□□□□□ -2.15
SHOXO15266 RNU4-58P-201ENST00000363192 141 ntBASIC1.63□□□□□ -2.15
SHOXO15266 Y_RNA.119-201ENST00000363301 96 ntBASIC1.63□□□□□ -2.15
SHOXO15266 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms