Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR376A2-201ENST00000636782 80 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 RNY3P11-201ENST00000364153 102 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 RNU6-720P-201ENST00000516363 108 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 AC006504.6-201ENST00000590142 199 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 AC092794.2-201ENST00000620933 563 ntBASIC-2.62□□□□□ -2.83
CHD1O14646 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 Y_RNA.470-201ENST00000384307 117 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 MTND4P28-201ENST00000426217 387 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 MIR548O2-201ENST00000616090 70 ntBASIC-2.63□□□□□ -2.83
CHD1O14646 Y_RNA.171-201ENST00000363760 102 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 MIR516A2-201ENST00000384888 90 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 MIR516A1-201ENST00000385033 90 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 MTCO2P24-201ENST00000515611 426 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 AL359881.1-201ENST00000602916 267 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 MIR6888-201ENST00000621977 67 ntBASIC-2.64□□□□□ -2.83
CHD1O14646 RNU6-874P-201ENST00000362390 105 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 RNU6-842P-201ENST00000384269 107 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 Y_RNA.135-201ENST00000363439 95 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 Y_RNA.381-201ENST00000365666 102 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 RPS3AP52-201ENST00000435639 297 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 MTCO2P4-201ENST00000517968 247 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 MIR4464-201ENST00000580818 92 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 AL157392.4-201ENST00000609756 345 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-2.65□□□□□ -2.83
CHD1O14646 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-2.65□□□□□ -2.83
CHD1O14646 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.66□□□□□ -2.84
CHD1O14646 Y_RNA.304-201ENST00000365011 112 ntBASIC-2.66□□□□□ -2.84
CHD1O14646 MTND1P2-201ENST00000430604 821 ntBASIC-2.66□□□□□ -2.84
CHD1O14646 MIR3942-201ENST00000585264 109 ntBASIC-2.66□□□□□ -2.84
CHD1O14646 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.66□□□□□ -2.84
CHD1O14646 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 SNORA69.1-201ENST00000390904 137 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 RNU6-400P-201ENST00000391173 106 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 MTND2P39-201ENST00000457230 764 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 RNU6-397P-201ENST00000516226 104 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 RNU6-256P-201ENST00000516747 97 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.67□□□□□ -2.84
CHD1O14646 MIR4724-201ENST00000579485 89 ntBASIC-2.67□□□□□ -2.84
CHD1O14646 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 Y_RNA.331-201ENST00000365267 102 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 RNY3P4-201ENST00000384428 101 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 MIR2053-201ENST00000459295 91 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 RNU6-803P-201ENST00000516034 102 ntBASIC-2.68□□□□□ -2.84
CHD1O14646 RNU6-297P-201ENST00000384636 107 ntBASIC-2.69□□□□□ -2.84
CHD1O14646 RN7SKP295-201ENST00000517264 153 ntBASIC-2.69□□□□□ -2.84
CHD1O14646 AC011476.5-201ENST00000615594 130 ntBASIC-2.69□□□□□ -2.84
CHD1O14646 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.7□□□□□ -2.84
CHD1O14646 RNU6-1205P-201ENST00000363625 106 ntBASIC-2.7□□□□□ -2.84
CHD1O14646 SNORD75.2-201ENST00000408784 58 ntBASIC-2.7□□□□□ -2.84
CHD1O14646 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.7□□□□□ -2.84
CHD1O14646 RNU6-762P-201ENST00000517107 102 ntBASIC-2.7□□□□□ -2.84
CHD1O14646 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.7□□□□□ -2.84
CHD1O14646 MIR4490-201ENST00000582647 84 ntBASIC-2.7□□□□□ -2.84
CHD1O14646 RNU6-695P-201ENST00000391157 104 ntBASIC-2.71□□□□□ -2.84
CHD1O14646 AL021368.1-201ENST00000607490 540 ntBASIC-2.71□□□□□ -2.84
CHD1O14646 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.71□□□□□ -2.84
CHD1O14646 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.71□□□□□ -2.84
CHD1O14646 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-2.71□□□□□ -2.84
CHD1O14646 RNU6-168P-201ENST00000516189 101 ntBASIC-2.71□□□□□ -2.84
CHD1O14646 MIR5692C2-201ENST00000577959 77 ntBASIC-2.71□□□□□ -2.84
CHD1O14646 RNU6-664P-201ENST00000362381 107 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 SNORD113-6-201ENST00000363345 75 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 Y_RNA.481-201ENST00000384373 102 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 AC144568.1-201ENST00000520139 137 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 AC084781.2-201ENST00000615568 161 ntBASIC-2.72□□□□□ -2.84
CHD1O14646 RNU6-1252P-201ENST00000363054 104 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 Y_RNA.212-201ENST00000364177 102 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 RNU6-522P-201ENST00000364497 107 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 RNU6-308P-201ENST00000390957 107 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 AC018880.2-201ENST00000414265 201 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 AC009779.6-201ENST00000603972 165 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 AC013791.1-201ENST00000616619 62 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 U6.100-201ENST00000636230 99 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 RNU6-79P-201ENST00000362511 107 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 AL353691.2-201ENST00000443795 59 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 MRPS36P3-201ENST00000519284 130 ntBASIC-2.73□□□□□ -2.85
CHD1O14646 SNORD115-22-201ENST00000364456 82 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 Y_RNA.299-201ENST00000364973 94 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 RNU6-102P-201ENST00000384485 104 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 AL593851.1-201ENST00000426171 157 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 MTCO2P19-201ENST00000427513 598 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 MIR5688-201ENST00000580619 83 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 AC018645.2-201ENST00000609151 472 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 AP001362.1-201ENST00000625165 124 ntBASIC-2.74□□□□□ -2.85
CHD1O14646 SNORD81.1-201ENST00000363064 77 ntBASIC-2.75□□□□□ -2.85
CHD1O14646 RNU6-54P-201ENST00000365563 107 ntBASIC-2.75□□□□□ -2.85
CHD1O14646 RNU6-243P-201ENST00000391140 107 ntBASIC-2.75□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 419.6 ms