Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL022718.1-201ENST00000412004 84 ntBASIC0.41□□□□□ -2.34
CLDN4O14493 RNA5SP236-201ENST00000516169 116 ntBASIC0.41□□□□□ -2.34
CLDN4O14493 SNORA25.12-201ENST00000516202 82 ntBASIC0.41□□□□□ -2.34
CLDN4O14493 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 AL078595.1-201ENST00000404458 226 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 RNU6-1086P-201ENST00000410930 100 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 AC096949.1-201ENST00000412047 152 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 RNU7-113P-201ENST00000459273 62 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 uc_338.16-201ENST00000621804 95 ntBASIC0.4□□□□□ -2.35
CLDN4O14493 Y_RNA.297-201ENST00000364950 91 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 RNU6-690P-201ENST00000365242 106 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 Y_RNA.470-201ENST00000384307 117 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 Y_RNA.567-201ENST00000384736 106 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 SNORA75.5-201ENST00000391291 81 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 SNORD71-201ENST00000411292 86 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 RNU6-469P-201ENST00000516253 101 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 MIR6844-201ENST00000637122 62 ntBASIC0.39□□□□□ -2.35
CLDN4O14493 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 Y_RNA.280-201ENST00000364765 112 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 Y_RNA.357-201ENST00000365487 109 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 Y_RNA.644-201ENST00000459006 113 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 RNU7-79P-201ENST00000516082 62 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 Y_RNA.674-201ENST00000516362 113 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 RNA5SP33-201ENST00000516687 98 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 RNU6-1271P-201ENST00000517049 105 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 MIR2909-201ENST00000617113 69 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.38□□□□□ -2.35
CLDN4O14493 Y_RNA.188-201ENST00000363952 111 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 SNORA32-201ENST00000384072 121 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 MIR644A-201ENST00000385262 94 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 SNORA25.16-201ENST00000516741 121 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 RNU6-765P-201ENST00000516916 99 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 AC072026.1-201ENST00000605023 201 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
CLDN4O14493 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
CLDN4O14493 Y_RNA.497-201ENST00000384447 98 ntBASIC0.36□□□□□ -2.35
CLDN4O14493 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
CLDN4O14493 Y_RNA.793-201ENST00000411222 111 ntBASIC0.36□□□□□ -2.35
CLDN4O14493 AL512326.2-201ENST00000426359 151 ntBASIC0.36□□□□□ -2.35
CLDN4O14493 RNU7-35P-201ENST00000517174 62 ntBASIC0.36□□□□□ -2.35
CLDN4O14493 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CLDN4O14493 Y_RNA.120-201ENST00000363304 110 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 Y_RNA.401-201ENST00000383965 117 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 SNORA8.2-201ENST00000384372 139 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 RNU6-239P-201ENST00000390990 99 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 RNU6-588P-201ENST00000410281 105 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 MTATP6P21-201ENST00000440681 189 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 Y_RNA.697-201ENST00000516776 113 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 AP002392.1-201ENST00000537692 208 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 MIR4305-201ENST00000583252 102 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 AC011603.4-201ENST00000611325 277 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 AC141273.2-201ENST00000618989 130 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 AC078938.1-201ENST00000620993 318 ntBASIC0.35□□□□□ -2.35
CLDN4O14493 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.34□□□□□ -2.35
CLDN4O14493 RNU6-379P-201ENST00000363813 104 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 SNORD37.2-201ENST00000391075 66 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 RNU6-240P-201ENST00000516098 97 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 SNORA31.14-201ENST00000516728 116 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 DEFB131E-201ENST00000532329 154 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 MTND5P34-201ENST00000568888 325 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 MIR3646-201ENST00000578301 84 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 MIR3658-201ENST00000636291 56 ntBASIC0.34□□□□□ -2.36
CLDN4O14493 SNORD115-2-201ENST00000362842 82 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 Y_RNA.174-201ENST00000363781 105 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 RNU4-84P-201ENST00000364200 139 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 SNORD115-20-201ENST00000365099 82 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 Y_RNA.536-201ENST00000384621 113 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 RNU6-291P-201ENST00000384720 107 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 RNU6-535P-201ENST00000384722 107 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 RNU2-35P-201ENST00000516446 142 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 AC022523.2-201ENST00000561045 150 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 AC138907.4-201ENST00000570107 226 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 MIR548AE2-201ENST00000583456 67 ntBASIC0.33□□□□□ -2.36
CLDN4O14493 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
CLDN4O14493 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 SNORA36.1-201ENST00000363424 132 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 SNORD118-201ENST00000363593 134 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 RNU6-35P-201ENST00000384530 107 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 Y_RNA.531-201ENST00000384589 121 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 Y_RNA.552-201ENST00000384665 112 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 RNU6-388P-201ENST00000517012 105 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 RNU6-389P-201ENST00000517048 105 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 RNU2-60P-201ENST00000517290 128 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN4O14493 AC021443.1-201ENST00000604478 211 ntBASIC0.32□□□□□ -2.36
CLDN4O14493 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
CLDN4O14493 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
CLDN4O14493 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
CLDN4O14493 RNA5SP133-201ENST00000363368 119 ntBASIC0.31□□□□□ -2.36
CLDN4O14493 SNORD18B-201ENST00000365659 72 ntBASIC0.31□□□□□ -2.36
CLDN4O14493 RNU6-1194P-201ENST00000516208 104 ntBASIC0.31□□□□□ -2.36
CLDN4O14493 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CLDN4O14493 RNA5SP285-201ENST00000516619 119 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms