Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 RNA5SP450-201ENST00000411206 102 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 HMGN2P38-201ENST00000423806 265 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 Y_RNA.648-201ENST00000459455 110 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 RNU7-193P-201ENST00000516723 65 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 AP000753.3-201ENST00000604083 169 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 SNORD38B-202ENST00000625943 69 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 MIR4251-201ENST00000635819 61 ntBASIC2.45□□□□□ -2.02
SPDYE3A6NKU9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 SNORA64-201ENST00000384674 134 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 AC244023.1-201ENST00000426884 112 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 HSPE1P24-201ENST00000450782 238 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 RNU6-75P-201ENST00000515944 104 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 RNU7-43P-201ENST00000516554 64 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 AC242498.1-201ENST00000604134 111 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 U1.36-201ENST00000620684 176 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 MIR219B-201ENST00000637023 88 ntBASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SPDYE3A6NKU9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 MIR424-201ENST00000362227 98 ntBASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 RNU6-949P-201ENST00000384040 107 ntBASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 MIR516A2-201ENST00000384888 90 ntBASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 MIR516A1-201ENST00000385033 90 ntBASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 AC009474.2-201ENST00000451383 136 ntBASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 MIR3124-201ENST00000582636 67 ntBASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SPDYE3A6NKU9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 MIRLET7F1-201ENST00000362202 87 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 SNORA72.6-201ENST00000384520 129 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 RNA5SP100-201ENST00000410903 110 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 RNA5SP59-201ENST00000410922 110 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 RNU6-871P-201ENST00000516122 100 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 RNA5SP481-201ENST00000516814 122 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 MIR4529-201ENST00000578110 78 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 MIR3064-201ENST00000581130 66 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 MIR4536-1-201ENST00000583537 88 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.42□□□□□ -2.02
SPDYE3A6NKU9 Y_RNA.119-201ENST00000363301 96 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 RNU6-540P-201ENST00000384622 101 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 MIR520H-201ENST00000385126 88 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 SNORA40.18-201ENST00000391200 128 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 MIR1261-201ENST00000408659 82 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 RNU6-634P-201ENST00000459134 106 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 FGF7P7-201ENST00000514120 227 ntBASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SPDYE3A6NKU9 RNU6-380P-201ENST00000410207 107 ntBASIC2.4□□□□□ -2.03
SPDYE3A6NKU9 AC104996.3-201ENST00000590718 94 ntBASIC2.4□□□□□ -2.03
SPDYE3A6NKU9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SPDYE3A6NKU9 AL596028.1-201ENST00000326971 197 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 SNORD36A-201ENST00000362874 73 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 RNU6-330P-201ENST00000363015 107 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 RNU6-203P-201ENST00000384038 104 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 RNU6-649P-201ENST00000384463 107 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 SNORD77.2-201ENST00000391045 68 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 MIR3935-201ENST00000583472 104 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 PRELID3BP2-201ENST00000605362 201 ntBASIC2.39□□□□□ -2.03
SPDYE3A6NKU9 Y_RNA.283-201ENST00000364798 112 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 SNORD115-31-201ENST00000365318 82 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 MIR588-201ENST00000384900 83 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 SNORD30.1-201ENST00000391309 70 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 RNU7-106P-201ENST00000459514 67 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 Y_RNA.681-201ENST00000516445 113 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 MIR4448-201ENST00000584360 86 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 uc_338.6-201ENST00000613544 171 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 MIR6740-201ENST00000618268 113 ntBASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.38□□□□□ -2.03
SPDYE3A6NKU9 AC131280.1-202ENST00000624067 4211 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 WWP1P1-201ENST00000466609 2769 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 Y_RNA.205-201ENST00000364128 113 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 SNORA25.9-201ENST00000365087 128 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 Y_RNA.491-201ENST00000384417 107 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 RNU6-587P-201ENST00000391282 106 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 Y_RNA.596-201ENST00000410462 109 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 snoU13.17-201ENST00000458802 104 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 snoU13.2-201ENST00000459201 104 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 SNORA31.17-201ENST00000516953 127 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 MIR6715A-201ENST00000615929 79 ntBASIC2.37□□□□□ -2.03
SPDYE3A6NKU9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 RNU6-208P-201ENST00000362431 107 ntBASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 RNU6-957P-201ENST00000363652 99 ntBASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 RNU6-571P-201ENST00000384128 107 ntBASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 RNU4-52P-201ENST00000384209 138 ntBASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 AC015818.7-201ENST00000428754 109 ntBASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 Y_RNA.660-201ENST00000516002 120 ntBASIC2.36□□□□□ -2.03
SPDYE3A6NKU9 RNU2-19P-201ENST00000517288 84 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms