Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 MIR3192-201ENST00000584920 77 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 AC012531.4-201ENST00000616509 177 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 MALAT1.1-201ENST00000618249 95 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 MIR8063-201ENST00000621930 81 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 RNA5SP48-201ENST00000363969 126 ntBASIC2.11□□□□□ -2.07
SNCAIPQ9Y6H5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.11□□□□□ -2.07
SNCAIPQ9Y6H5 Y_RNA.659-201ENST00000515994 113 ntBASIC2.11□□□□□ -2.07
SNCAIPQ9Y6H5 AL357312.1-201ENST00000603879 298 ntBASIC2.11□□□□□ -2.07
SNCAIPQ9Y6H5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-170P-201ENST00000362832 104 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 SNORD73B-201ENST00000364394 72 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-1201P-201ENST00000384227 107 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 MIR206-201ENST00000384872 86 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 SNORD67.1-201ENST00000516618 108 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 AL096861.1-201ENST00000610899 123 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 GHRLOS.1-201ENST00000610995 70 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 AL442128.1-201ENST00000615151 90 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 MIR8070-201ENST00000616510 88 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
SNCAIPQ9Y6H5 Y_RNA.342-201ENST00000365352 113 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 RNA5SP237-201ENST00000410414 113 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 RNU7-61P-201ENST00000515897 61 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 MIR548Z-201ENST00000584743 97 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 AC096720.1-201ENST00000604441 183 ntBASIC2.09□□□□□ -2.07
SNCAIPQ9Y6H5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-1313P-201ENST00000362622 102 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 SNORA25.3-201ENST00000363205 127 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 SNORD45B-201ENST00000364617 72 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.466-201ENST00000384294 113 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 SNORA67.5-201ENST00000391036 107 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-644P-201ENST00000391155 98 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 PRELID3BP2-201ENST00000605362 201 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 AC105081.1-201ENST00000617727 106 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 AC091304.10-201ENST00000641554 121 ntBASIC2.08□□□□□ -2.08
SNCAIPQ9Y6H5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.377-201ENST00000365644 108 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.558-201ENST00000384685 113 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 AC004941.2-201ENST00000427009 228 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 HSPE1P24-201ENST00000450782 238 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 TRMT112P2-201ENST00000512910 132 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-162P-201ENST00000516228 103 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-844P-201ENST00000517175 102 ntBASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SNCAIPQ9Y6H5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 MIR337-201ENST00000362281 93 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 RNY1P10-201ENST00000363268 113 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.448-201ENST00000384185 108 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-1307P-201ENST00000391012 103 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 AC244023.1-201ENST00000426884 112 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 AC027119.1-201ENST00000440877 241 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 snoU13.9-201ENST00000458927 103 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 AC242498.1-201ENST00000604134 111 ntBASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-865P-201ENST00000364772 107 ntBASIC2.05□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-60P-201ENST00000364792 103 ntBASIC2.05□□□□□ -2.08
SNCAIPQ9Y6H5 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
SNCAIPQ9Y6H5 RPL39P39-201ENST00000455840 151 ntBASIC2.05□□□□□ -2.08
SNCAIPQ9Y6H5 AC005908.1-201ENST00000468701 347 ntBASIC2.05□□□□□ -2.08
SNCAIPQ9Y6H5 UBL5P1-201ENST00000507979 193 ntBASIC2.05□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.95-201ENST00000363079 95 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 SNORD114-10-201ENST00000363409 72 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 SUMO2P12-201ENST00000405924 140 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 AC096949.1-201ENST00000412047 152 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 RPS29P28-201ENST00000446439 141 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 RNU7-95P-201ENST00000459222 64 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 RNU7-137P-201ENST00000516788 62 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 MIR4777-201ENST00000583710 86 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 MIR376B-201ENST00000614515 100 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 U7.3-201ENST00000616123 62 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
SNCAIPQ9Y6H5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.247-201ENST00000364500 92 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.290-201ENST00000364879 114 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 RNY1P13-201ENST00000365030 105 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-396P-201ENST00000365369 105 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 Y_RNA.467-201ENST00000384297 102 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 MIR34C-201ENST00000384831 77 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 MIR499A-201ENST00000384903 122 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-1321P-201ENST00000390905 107 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 MIR1302-4-201ENST00000408701 150 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 RNU6-762P-201ENST00000517107 102 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 AC019176.1-201ENST00000518519 225 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 AC141846.1-201ENST00000568348 142 ntBASIC2.03□□□□□ -2.08
SNCAIPQ9Y6H5 MIR3198-2-201ENST00000577868 80 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms