Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 RNU7-195P-201ENST00000458793 62 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 RNU7-62P-201ENST00000458856 62 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR2113-201ENST00000459007 91 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR4491-201ENST00000581087 68 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 U6.81-201ENST00000612550 106 ntBASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA4Q9Y5G9 SNORD113.1-201ENST00000363280 73 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 SNORA5B-201ENST00000363786 132 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 RNU6-360P-201ENST00000390944 104 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 AC092427.1-202ENST00000430569 476 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 RN7SL863P-201ENST00000462370 296 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR5089-201ENST00000580047 84 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 AL033523.1-201ENST00000605153 153 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 FO624990.1-201ENST00000636373 85 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 AL035425.3-201ENST00000564206 4996 ntBASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA4Q9Y5G9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 SNORD101-201ENST00000384027 73 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 Y_RNA.536-201ENST00000384621 113 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR519A1-201ENST00000385257 85 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 SNORD100-201ENST00000408573 76 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR1302-7-201ENST00000408841 72 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 RN7SL429P-201ENST00000479090 223 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 RN7SL489P-201ENST00000486185 223 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 RN7SL327P-201ENST00000488659 223 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 TRAJ51-201ENST00000504127 63 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR4696-201ENST00000581431 70 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 MIR4672-201ENST00000583126 81 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 RNU7-10P-201ENST00000607194 63 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 RN7SL853P-201ENST00000617250 223 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 AC069503.3-201ENST00000618674 145 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 AL137790.1-201ENST00000634283 177 ntBASIC3.09□□□□□ -1.91
PCDHGA4Q9Y5G9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU1-51P-201ENST00000365345 176 ntBASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 MT-TN-201ENST00000387400 73 ntBASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 AL606490.4-201ENST00000423117 127 ntBASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 SUMO1P4-201ENST00000429430 302 ntBASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 GTF3AP2-201ENST00000557014 266 ntBASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 U1.36-201ENST00000620684 176 ntBASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCDHGA4Q9Y5G9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 MIR101-2-201ENST00000362195 79 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 SNORA24B-201ENST00000384176 131 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 Y_RNA.588-201ENST00000391254 102 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 Y_RNA.809-201ENST00000516058 95 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 MIR548H5-201ENST00000580314 60 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA4Q9Y5G9 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6-1260P-201ENST00000362944 107 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6-203P-201ENST00000384038 104 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6-301P-201ENST00000384277 107 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 AL139132.1-201ENST00000431587 344 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 AC003982.1-202ENST00000469928 248 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 MIR2115-201ENST00000516657 100 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 MIR3192-201ENST00000584920 77 ntBASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGA4Q9Y5G9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6-824P-201ENST00000363724 104 ntBASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6-604P-201ENST00000390917 100 ntBASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 SNORD93-201ENST00000408813 74 ntBASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 AC004965.1-201ENST00000413033 213 ntBASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 RPL30P7-201ENST00000479312 323 ntBASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA4Q9Y5G9 U8.13-201ENST00000390842 128 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 RNA5SP100-201ENST00000410903 110 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 RNA5SP59-201ENST00000410922 110 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 RNU6-977P-201ENST00000516411 103 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 U6.100-201ENST00000636230 99 ntBASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA4Q9Y5G9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 SNORA25.3-201ENST00000363205 127 ntBASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 379.1 ms