Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-1258P-201ENST00000516911 111 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-53P-201ENST00000365367 106 ntBASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 MIR548A3-201ENST00000385297 97 ntBASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 MT-TN-201ENST00000387400 73 ntBASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 AL670379.3-201ENST00000605040 251 ntBASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-1056P-201ENST00000383996 107 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 Y_RNA.649-201ENST00000459077 103 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 RPS23P4-201ENST00000487908 423 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 SNORD33.1-201ENST00000516213 88 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 RNA5SP33-201ENST00000516687 98 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 MIR3163-201ENST00000581592 73 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 MIR4264-201ENST00000583520 66 ntBASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-1290P-201ENST00000362957 109 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 RNY4P6-201ENST00000363667 96 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-1104P-201ENST00000384723 104 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-613P-201ENST00000410412 108 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-1064P-201ENST00000410626 104 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 AC244023.1-201ENST00000426884 112 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 AC022523.2-201ENST00000561045 150 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 AC242498.1-201ENST00000604134 111 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 MIR6516-201ENST00000630554 81 ntBASIC1.36□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-1144P-201ENST00000384247 104 ntBASIC1.35□□□□□ -2.19
SSX2IPQ9Y2D8 Y_RNA.470-201ENST00000384307 117 ntBASIC1.35□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-476P-201ENST00000384726 107 ntBASIC1.35□□□□□ -2.19
SSX2IPQ9Y2D8 RNU4-69P-201ENST00000410677 143 ntBASIC1.35□□□□□ -2.19
SSX2IPQ9Y2D8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.35□□□□□ -2.19
SSX2IPQ9Y2D8 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
SSX2IPQ9Y2D8 MIR377-201ENST00000362145 69 ntBASIC1.34□□□□□ -2.19
SSX2IPQ9Y2D8 SNORD114-26-201ENST00000363543 72 ntBASIC1.34□□□□□ -2.19
SSX2IPQ9Y2D8 SNORD12C-201ENST00000386307 89 ntBASIC1.34□□□□□ -2.19
SSX2IPQ9Y2D8 RNU6-735P-201ENST00000410612 107 ntBASIC1.34□□□□□ -2.19
SSX2IPQ9Y2D8 snoU13.2-201ENST00000459201 104 ntBASIC1.34□□□□□ -2.19
SSX2IPQ9Y2D8 MTND5P34-201ENST00000568888 325 ntBASIC1.34□□□□□ -2.19
SSX2IPQ9Y2D8 RNA5SP325-201ENST00000363756 130 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA18-201ENST00000384416 132 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA80D-201ENST00000384488 135 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD77B-201ENST00000391112 67 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 RNU7-6P-201ENST00000516845 62 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 MIR548AE2-201ENST00000583456 67 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 AC022709.1-201ENST00000615967 87 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 MIR6779-201ENST00000617283 64 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 MIR6515-201ENST00000619843 57 ntBASIC1.33□□□□□ -2.2
SSX2IPQ9Y2D8 MIR588-201ENST00000384900 83 ntBASIC1.32□□□□□ -2.2
SSX2IPQ9Y2D8 MT-TI-201ENST00000387365 69 ntBASIC1.32□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
SSX2IPQ9Y2D8 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
SSX2IPQ9Y2D8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD116-21-201ENST00000384507 92 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 MIR548D2-201ENST00000384955 97 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 MIR548A1-201ENST00000385041 97 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 RNA5SP237-201ENST00000410414 113 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-1086P-201ENST00000410930 100 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 MRPL35P3-201ENST00000421557 364 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 AC007012.1-201ENST00000567192 175 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 MIR4679-2-201ENST00000578358 77 ntBASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.31□□□□□ -2.2
SSX2IPQ9Y2D8 MIR96-201ENST00000362288 78 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-654P-201ENST00000364373 107 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-580P-201ENST00000365159 107 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-880P-201ENST00000384526 107 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-205P-201ENST00000390858 107 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA75.2-201ENST00000391138 150 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA75.3-201ENST00000391231 150 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 RNU7-35P-201ENST00000517174 62 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA32-201ENST00000384072 121 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-1237P-201ENST00000384777 107 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 MIR563-201ENST00000385080 79 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD79.1-201ENST00000516069 84 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 AC087741.2-201ENST00000619415 172 ntBASIC1.29□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD115-19-201ENST00000363098 82 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD115-18-201ENST00000363293 82 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD115-17-201ENST00000364612 82 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 SNORA2B-201ENST00000384583 137 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms