Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SNORD109B-201ENST00000458961 67 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 SNORD109A-201ENST00000459128 67 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 MIR466-201ENST00000580653 84 ntBASIC3.54□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-461P-201ENST00000364195 107 ntBASIC3.53□□□□□ -1.84
TRIM35Q9UPQ4 RNU6-53P-201ENST00000365367 106 ntBASIC3.53□□□□□ -1.84
TRIM35Q9UPQ4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.53□□□□□ -1.84
TRIM35Q9UPQ4 AL606490.4-201ENST00000423117 127 ntBASIC3.53□□□□□ -1.84
TRIM35Q9UPQ4 MIR6740-201ENST00000618268 113 ntBASIC3.53□□□□□ -1.84
TRIM35Q9UPQ4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM35Q9UPQ4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 SNORA5B-201ENST00000363786 132 ntBASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 MIR597-201ENST00000384968 97 ntBASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 MIR1289-1-201ENST00000408836 144 ntBASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 RNU7-195P-201ENST00000458793 62 ntBASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-752P-201ENST00000516376 102 ntBASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 PRELID3BP2-201ENST00000605362 201 ntBASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM35Q9UPQ4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-1184P-201ENST00000384588 108 ntBASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 MIR519A1-201ENST00000385257 85 ntBASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 SNORA9.3-201ENST00000516383 129 ntBASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-542P-201ENST00000516405 103 ntBASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 RNA5SP481-201ENST00000516814 122 ntBASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 MIR4672-201ENST00000583126 81 ntBASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRIM35Q9UPQ4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-369P-201ENST00000362515 102 ntBASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-446P-201ENST00000362827 106 ntBASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-940P-201ENST00000363433 104 ntBASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 SNORA25.5-201ENST00000363782 126 ntBASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-1165P-201ENST00000410119 107 ntBASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 MAPK10-362ENST00000641864 4484 ntBASIC3.5□□□□□ -1.85
TRIM35Q9UPQ4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 RNU11-3P-201ENST00000391111 133 ntBASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 TRAJ51-201ENST00000504127 63 ntBASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 U6.100-201ENST00000636230 99 ntBASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-1260P-201ENST00000362944 107 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 RNA5SP48-201ENST00000363969 126 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-274P-201ENST00000459566 107 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 RNVU1-2-201ENST00000516326 135 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 SNORA25.16-201ENST00000516741 121 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 AC022202.1-201ENST00000613515 211 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.48□□□□□ -1.85
TRIM35Q9UPQ4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 RNU6-654P-201ENST00000364373 107 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 RNA5SP192-201ENST00000364404 120 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 Y_RNA.536-201ENST00000384621 113 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 MT-TF-201ENST00000387314 71 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 SNORD100-201ENST00000408573 76 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 RNA5SP184-201ENST00000411071 108 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 AC104332.2-201ENST00000429959 156 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 Y_RNA.809-201ENST00000516058 95 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 MIR4491-201ENST00000581087 68 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 MTRNR2L2-201ENST00000604882 87 ntBASIC3.47□□□□□ -1.85
TRIM35Q9UPQ4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 SNORA16B-201ENST00000364674 135 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-1335P-201ENST00000365426 107 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-935P-201ENST00000410371 100 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-982P-201ENST00000516216 102 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 RNA5SP282-201ENST00000516355 108 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 MIR3162-201ENST00000581818 82 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 RNU7-10P-201ENST00000607194 63 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 MIR6852-201ENST00000621699 66 ntBASIC3.46□□□□□ -1.86
TRIM35Q9UPQ4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-859P-201ENST00000362728 107 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 Y_RNA.375-201ENST00000365625 101 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 MIR634-201ENST00000385208 97 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 U8.13-201ENST00000390842 128 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-1052P-201ENST00000411398 104 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 MTND4LP1-201ENST00000446263 157 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 RNU7-26P-201ENST00000458980 63 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-719P-201ENST00000516671 104 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 MIR4264-201ENST00000583520 66 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 MIR4635-201ENST00000583759 79 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 MIR4773-1-201ENST00000637203 78 ntBASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM35Q9UPQ4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-112P-201ENST00000363599 104 ntBASIC3.44□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-668P-201ENST00000364180 107 ntBASIC3.44□□□□□ -1.86
TRIM35Q9UPQ4 SNORD21-201ENST00000383953 95 ntBASIC3.44□□□□□ -1.86
TRIM35Q9UPQ4 AC092185.1-201ENST00000491371 97 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms