Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNU7-41P-201ENST00000515917 61 ntBASIC3.44□□□□□ -1.86
PHF8Q9UPP1 RNU6-303P-201ENST00000517091 106 ntBASIC3.44□□□□□ -1.86
PHF8Q9UPP1 MIR4484-201ENST00000582855 83 ntBASIC3.44□□□□□ -1.86
PHF8Q9UPP1 MIR653-201ENST00000385279 96 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 RNU6-360P-201ENST00000390944 104 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 AC244023.1-201ENST00000426884 112 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 AC005908.1-201ENST00000468701 347 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 AC015712.3-201ENST00000559380 164 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 MIR3064-201ENST00000581130 66 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 SNORA4-201ENST00000584302 138 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 SNORD92-201ENST00000585078 85 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 AC242498.1-201ENST00000604134 111 ntBASIC3.43□□□□□ -1.86
PHF8Q9UPP1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHF8Q9UPP1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PHF8Q9UPP1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.43□□□□□ -1.86
PHF8Q9UPP1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PHF8Q9UPP1 RNU6-208P-201ENST00000362431 107 ntBASIC3.42□□□□□ -1.86
PHF8Q9UPP1 Y_RNA.283-201ENST00000364798 112 ntBASIC3.42□□□□□ -1.86
PHF8Q9UPP1 MIR563-201ENST00000385080 79 ntBASIC3.42□□□□□ -1.86
PHF8Q9UPP1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.42□□□□□ -1.86
PHF8Q9UPP1 AL591806.2-201ENST00000433122 173 ntBASIC3.42□□□□□ -1.86
PHF8Q9UPP1 MIR1273D-201ENST00000577266 86 ntBASIC3.42□□□□□ -1.86
PHF8Q9UPP1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHF8Q9UPP1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHF8Q9UPP1 Y_RNA.491-201ENST00000384417 107 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 MIR588-201ENST00000384900 83 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 RNU6-587P-201ENST00000391282 106 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 AC015818.7-201ENST00000428754 109 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 Z96811.1-201ENST00000445880 108 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 SNORA31.15-201ENST00000516771 132 ntBASIC3.41□□□□□ -1.86
PHF8Q9UPP1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PHF8Q9UPP1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PHF8Q9UPP1 RNU6-466P-201ENST00000391224 103 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 AC074348.1-201ENST00000426503 132 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 RN7SL499P-201ENST00000481141 276 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 RNA5SP445-201ENST00000515889 115 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 RNU6-75P-201ENST00000515944 104 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 DEFB122-202ENST00000569013 197 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.4□□□□□ -1.87
PHF8Q9UPP1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 RNU6-132P-201ENST00000383863 107 ntBASIC3.39□□□□□ -1.87
PHF8Q9UPP1 Y_RNA.386-201ENST00000383913 105 ntBASIC3.39□□□□□ -1.87
PHF8Q9UPP1 RNA5SP492-201ENST00000411330 114 ntBASIC3.39□□□□□ -1.87
PHF8Q9UPP1 AC046143.2-201ENST00000609789 160 ntBASIC3.39□□□□□ -1.87
PHF8Q9UPP1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PHF8Q9UPP1 SNORD56.5-201ENST00000364281 72 ntBASIC3.38□□□□□ -1.87
PHF8Q9UPP1 MIR516A2-201ENST00000384888 90 ntBASIC3.38□□□□□ -1.87
PHF8Q9UPP1 MIR516A1-201ENST00000385033 90 ntBASIC3.38□□□□□ -1.87
PHF8Q9UPP1 PRELID3BP2-201ENST00000605362 201 ntBASIC3.38□□□□□ -1.87
PHF8Q9UPP1 AC067747.1-201ENST00000608026 250 ntBASIC3.38□□□□□ -1.87
PHF8Q9UPP1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.38□□□□□ -1.87
PHF8Q9UPP1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.38□□□□□ -1.87
PHF8Q9UPP1 AL603825.1-201ENST00000438481 80 ntBASIC3.37□□□□□ -1.87
PHF8Q9UPP1 AC245517.4-201ENST00000448601 281 ntBASIC3.37□□□□□ -1.87
PHF8Q9UPP1 AC108210.2-201ENST00000503681 201 ntBASIC3.37□□□□□ -1.87
PHF8Q9UPP1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PHF8Q9UPP1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PHF8Q9UPP1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHF8Q9UPP1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.36□□□□□ -1.87
PHF8Q9UPP1 Y_RNA.205-201ENST00000364128 113 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 SNORD30.1-201ENST00000391309 70 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 RNA5SP100-201ENST00000410903 110 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 RNA5SP59-201ENST00000410922 110 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PHF8Q9UPP1 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.36□□□□□ -1.87
PHF8Q9UPP1 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.36□□□□□ -1.87
PHF8Q9UPP1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHF8Q9UPP1 AC016717.2-201ENST00000609089 5141 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 SNORD114-1-201ENST00000362705 72 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 RNA5SP456-201ENST00000364002 114 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 Y_RNA.596-201ENST00000410462 109 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 SNORD111.1-201ENST00000516421 86 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 YWHAEP2-201ENST00000580066 112 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 YWHAEP3-201ENST00000582767 121 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PHF8Q9UPP1 AC131280.1-202ENST00000624067 4211 ntBASIC3.35□□□□□ -1.87
PHF8Q9UPP1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PHF8Q9UPP1 RNU6-396P-201ENST00000365369 105 ntBASIC3.34□□□□□ -1.87
PHF8Q9UPP1 MIR4264-201ENST00000583520 66 ntBASIC3.34□□□□□ -1.87
PHF8Q9UPP1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
PHF8Q9UPP1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PHF8Q9UPP1 MIR30D-201ENST00000362283 70 ntBASIC3.33□□□□□ -1.88
PHF8Q9UPP1 RNA5SP210-201ENST00000391034 120 ntBASIC3.33□□□□□ -1.88
PHF8Q9UPP1 RNU6-482P-201ENST00000391068 107 ntBASIC3.33□□□□□ -1.88
PHF8Q9UPP1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.33□□□□□ -1.88
PHF8Q9UPP1 RNU6-800P-201ENST00000384473 103 ntBASIC3.32□□□□□ -1.88
PHF8Q9UPP1 MIR518E-201ENST00000385252 88 ntBASIC3.32□□□□□ -1.88
PHF8Q9UPP1 HMGN2P35-201ENST00000412164 270 ntBASIC3.32□□□□□ -1.88
PHF8Q9UPP1 AC004965.1-201ENST00000413033 213 ntBASIC3.32□□□□□ -1.88
PHF8Q9UPP1 UBBP3-201ENST00000445497 241 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms