Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
TMEM39AQ9NV64 Y_RNA.290-201ENST00000364879 114 ntBASIC2.15□□□□□ -2.07
TMEM39AQ9NV64 SNORA26.2-201ENST00000390922 122 ntBASIC2.15□□□□□ -2.07
TMEM39AQ9NV64 RNA5SP237-201ENST00000410414 113 ntBASIC2.15□□□□□ -2.07
TMEM39AQ9NV64 HSPE1P24-201ENST00000450782 238 ntBASIC2.15□□□□□ -2.07
TMEM39AQ9NV64 PRELID3BP2-201ENST00000605362 201 ntBASIC2.15□□□□□ -2.07
TMEM39AQ9NV64 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TMEM39AQ9NV64 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.448-201ENST00000384185 108 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 RNY4P29-201ENST00000410801 97 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 MRPL35P3-201ENST00000421557 364 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 RNU6-162P-201ENST00000516228 103 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 RNU6-947P-201ENST00000516264 106 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 RNU7-137P-201ENST00000516788 62 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 SNRPGP19-201ENST00000603826 189 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 U7.3-201ENST00000616123 62 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 AC105081.1-201ENST00000617727 106 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 MIR8063-201ENST00000621930 81 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
TMEM39AQ9NV64 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 SNORA25.3-201ENST00000363205 127 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 SNORD114-10-201ENST00000363409 72 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.247-201ENST00000364500 92 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 RNU6-865P-201ENST00000364772 107 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.355-201ENST00000365462 98 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.467-201ENST00000384297 102 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 MIR499A-201ENST00000384903 122 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 AC244023.1-201ENST00000426884 112 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 AC003989.2-201ENST00000440224 169 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 TRMT112P2-201ENST00000512910 132 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 RNU6-250P-201ENST00000516958 103 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 AC026421.1-201ENST00000519101 163 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 AC242498.1-201ENST00000604134 111 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 MIR376B-201ENST00000614515 100 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 MIR8070-201ENST00000616510 88 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.96-201ENST00000363092 109 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1134P-201ENST00000365156 101 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 MIR34C-201ENST00000384831 77 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1321P-201ENST00000390905 107 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 RPS29P28-201ENST00000446439 141 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 AC141846.1-201ENST00000568348 142 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 AL359821.1-201ENST00000605519 182 ntBASIC2.12□□□□□ -2.07
TMEM39AQ9NV64 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 RNY1P10-201ENST00000363268 113 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 RNY1P13-201ENST00000365030 105 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 RNU4-62P-201ENST00000410125 130 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 AC109327.2-201ENST00000448339 378 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.705-201ENST00000516862 110 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1006P-201ENST00000516998 103 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 AC103810.8-201ENST00000607347 118 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
TMEM39AQ9NV64 SNORD38.1-201ENST00000363863 68 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 SNORA25.9-201ENST00000365087 128 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 RNU6-396P-201ENST00000365369 105 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.388-201ENST00000383919 113 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 MIR1302-7-201ENST00000408841 72 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 AP1B1P2-201ENST00000416196 106 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 AC027119.1-201ENST00000440877 241 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 RPL39P39-201ENST00000455840 151 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 snoU13.9-201ENST00000458927 103 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 MIR4439-201ENST00000583746 80 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 AL662814.1-201ENST00000617364 121 ntBASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TMEM39AQ9NV64 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-447P-201ENST00000410293 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1118P-201ENST00000410382 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1076P-201ENST00000410397 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-355P-201ENST00000410427 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-791P-201ENST00000410467 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-705P-201ENST00000410601 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1100P-201ENST00000410691 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-860P-201ENST00000410860 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-1217P-201ENST00000411276 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU6-785P-201ENST00000411324 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 RNU7-48P-201ENST00000458875 63 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 snoU13.2-201ENST00000459201 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 AC005908.1-201ENST00000468701 347 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 AC062037.1-201ENST00000605302 128 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 U6.90-201ENST00000614007 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 U6.70-201ENST00000620287 104 ntBASIC2.09□□□□□ -2.07
TMEM39AQ9NV64 Y_RNA.98-201ENST00000363109 102 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 MIR588-201ENST00000384900 83 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 RNU6-972P-201ENST00000391208 107 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms