Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU6-918P-201ENST00000391219 106 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 MIR1287-201ENST00000408492 90 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 AC096949.1-201ENST00000412047 152 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 MIR4491-201ENST00000581087 68 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 MIR6082-201ENST00000613604 109 ntBASIC0.3□□□□□ -2.36
EXOSC3Q9NQT5 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 Y_RNA.52-201ENST00000362760 96 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 RNY1P13-201ENST00000365030 105 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 RNU6-47P-201ENST00000383866 107 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 RNY1P6-201ENST00000384193 109 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 RNU6-196P-201ENST00000384315 107 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 MIR936-201ENST00000401264 98 ntBASIC0.29□□□□□ -2.36
EXOSC3Q9NQT5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 RNU6-768P-201ENST00000384683 107 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 SNORA25.16-201ENST00000516741 121 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 AC022709.1-201ENST00000615967 87 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 uc_338.16-201ENST00000621804 95 ntBASIC0.28□□□□□ -2.36
EXOSC3Q9NQT5 MIR411-201ENST00000362239 96 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.83-201ENST00000363005 113 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.116-201ENST00000363292 103 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.193-201ENST00000363979 102 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 RNY1-201ENST00000364228 113 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.515-201ENST00000384535 112 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP144-201ENST00000410846 116 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-469P-201ENST00000516253 101 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 MIR4431-201ENST00000579990 94 ntBASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.27□□□□□ -2.37
EXOSC3Q9NQT5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.200-201ENST00000364018 102 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-1082P-201ENST00000364574 107 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.393-201ENST00000383936 102 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-893P-201ENST00000458841 100 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 RNU7-79P-201ENST00000516082 62 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 SNORA31.14-201ENST00000516728 116 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 MTND5P34-201ENST00000568888 325 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 MIR3149-201ENST00000584629 83 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 AC099654.10-201ENST00000640395 161 ntBASIC0.26□□□□□ -2.37
EXOSC3Q9NQT5 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-1020P-201ENST00000363684 107 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 SNORA32-201ENST00000384072 121 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 AL512326.2-201ENST00000426359 151 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 RNU7-113P-201ENST00000459273 62 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-1219P-201ENST00000516143 112 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP236-201ENST00000516169 116 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 AC022559.1-201ENST00000520905 205 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.25□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-42P-201ENST00000384165 107 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.452-201ENST00000384202 108 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-291P-201ENST00000384720 107 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 AL022718.1-201ENST00000412004 84 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP33-201ENST00000516687 98 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.697-201ENST00000516776 113 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-765P-201ENST00000516916 99 ntBASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-690P-201ENST00000365242 106 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.435-201ENST00000384095 112 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.536-201ENST00000384621 113 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 MIR518E-201ENST00000385252 88 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 AC107027.2-201ENST00000512197 115 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 AC130289.1-201ENST00000577321 73 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 MIR6734-201ENST00000621166 68 ntBASIC0.23□□□□□ -2.37
EXOSC3Q9NQT5 AC090625.1-201ENST00000357130 210 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-818P-201ENST00000364837 108 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-535P-201ENST00000384722 107 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 SUMO1P3-201ENST00000439961 304 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 RNU6-531P-201ENST00000516694 104 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 RNU7-35P-201ENST00000517174 62 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 DEFB131E-201ENST00000532329 154 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
EXOSC3Q9NQT5 Y_RNA.120-201ENST00000363304 110 ntBASIC0.21□□□□□ -2.38
EXOSC3Q9NQT5 RNA5SP133-201ENST00000363368 119 ntBASIC0.21□□□□□ -2.38
EXOSC3Q9NQT5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.21□□□□□ -2.38
EXOSC3Q9NQT5 Y_RNA.233-201ENST00000364407 101 ntBASIC0.21□□□□□ -2.38
EXOSC3Q9NQT5 RNU6-588P-201ENST00000410281 105 ntBASIC0.21□□□□□ -2.38
EXOSC3Q9NQT5 Y_RNA.793-201ENST00000411222 111 ntBASIC0.21□□□□□ -2.38
EXOSC3Q9NQT5 RNU6-240P-201ENST00000516098 97 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms