Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 RNU2-60P-201ENST00000517290 128 ntBASIC0.44□□□□□ -2.34
ELL3Q9HB65 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
ELL3Q9HB65 AL589743.1-201ENST00000551932 2712 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 Y_RNA.13-201ENST00000362403 112 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 RNY1P13-201ENST00000365030 105 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 Y_RNA.393-201ENST00000383936 102 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
ELL3Q9HB65 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.43□□□□□ -2.34
ELL3Q9HB65 MIR4491-201ENST00000581087 68 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 AC078938.1-201ENST00000620993 318 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
ELL3Q9HB65 RNU6-1020P-201ENST00000363684 107 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 Y_RNA.233-201ENST00000364407 101 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 RNA5SP237-201ENST00000410414 113 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 RNA5SP144-201ENST00000410846 116 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 RNU4-83P-201ENST00000410863 133 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 RNU5E-9P-201ENST00000411164 104 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
ELL3Q9HB65 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 RNU6-949P-201ENST00000384040 107 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 RNU6-42P-201ENST00000384165 107 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 SNORA20-201ENST00000384662 132 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 RNU6-588P-201ENST00000410281 105 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 AL512326.2-201ENST00000426359 151 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 RNU6-448P-201ENST00000517052 107 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.41□□□□□ -2.34
ELL3Q9HB65 MIR3678-201ENST00000578455 94 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 MIR3658-201ENST00000636291 56 ntBASIC0.41□□□□□ -2.34
ELL3Q9HB65 RNU6-403P-201ENST00000363163 104 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 RNU6-312P-201ENST00000364629 107 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 Y_RNA.297-201ENST00000364950 91 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 RNY1P6-201ENST00000384193 109 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 Y_RNA.497-201ENST00000384447 98 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 MIR644A-201ENST00000385262 94 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 Y_RNA.644-201ENST00000459006 113 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 Y_RNA.674-201ENST00000516362 113 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 RNU6-388P-201ENST00000517012 105 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 RNU6-389P-201ENST00000517048 105 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 AC022709.1-201ENST00000615967 87 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
ELL3Q9HB65 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.39□□□□□ -2.35
ELL3Q9HB65 RNU6-818P-201ENST00000364837 108 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 MIR518E-201ENST00000385252 88 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 Y_RNA.793-201ENST00000411222 111 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 RNU7-79P-201ENST00000516082 62 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 RNU2-35P-201ENST00000516446 142 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 RNU7-121P-201ENST00000516604 62 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 RNU6-1271P-201ENST00000517049 105 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.39□□□□□ -2.35
ELL3Q9HB65 Y_RNA.120-201ENST00000363304 110 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 SNORA36.1-201ENST00000363424 132 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 MIR1270-201ENST00000459320 83 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 RNU7-35P-201ENST00000517174 62 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 AC133485.4-201ENST00000561835 220 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 MTND5P34-201ENST00000568888 325 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 MIR6082-201ENST00000613604 109 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
ELL3Q9HB65 Y_RNA.188-201ENST00000363952 111 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 Y_RNA.489-201ENST00000384410 101 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
ELL3Q9HB65 AC107027.2-201ENST00000512197 115 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.37□□□□□ -2.35
ELL3Q9HB65 MIR6513-201ENST00000621188 64 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 uc_338.16-201ENST00000621804 95 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 MIR6844-201ENST00000637122 62 ntBASIC0.37□□□□□ -2.35
ELL3Q9HB65 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 SNORD115-2-201ENST00000362842 82 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 RNU6-682P-201ENST00000363843 106 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 RNU4-84P-201ENST00000364200 139 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 SNORD115-20-201ENST00000365099 82 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 RNA5SP117-201ENST00000365294 118 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 Y_RNA.337-201ENST00000365312 102 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 SNORA32-201ENST00000384072 121 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 RNU6-1086P-201ENST00000410930 100 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 Y_RNA.651-201ENST00000459380 103 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 RNU6-138P-201ENST00000515952 107 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 RNU6-861P-201ENST00000516745 106 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 AL359881.1-201ENST00000602916 267 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 MIR6515-201ENST00000619843 57 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 AC092634.7-201ENST00000621022 103 ntBASIC0.36□□□□□ -2.35
ELL3Q9HB65 SNORD44.1-201ENST00000363202 61 ntBASIC0.35□□□□□ -2.35
ELL3Q9HB65 RNU6-309P-201ENST00000364573 106 ntBASIC0.35□□□□□ -2.35
ELL3Q9HB65 Y_RNA.355-201ENST00000365462 98 ntBASIC0.35□□□□□ -2.35
ELL3Q9HB65 Y_RNA.366-201ENST00000365540 102 ntBASIC0.35□□□□□ -2.35
ELL3Q9HB65 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
ELL3Q9HB65 RNU6-239P-201ENST00000390990 99 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms