Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 RNU6-785P-201ENST00000411324 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1258P-201ENST00000516911 111 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 AC130289.1-201ENST00000577321 73 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 U6.90-201ENST00000614007 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 U6.70-201ENST00000620287 104 ntBASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.83-201ENST00000363005 113 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 SNORA25.7-201ENST00000364375 127 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.435-201ENST00000384095 112 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 SNORA20-201ENST00000384662 132 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 RNU6-768P-201ENST00000384683 107 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 SNORD100-201ENST00000408573 76 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 SNORD93-201ENST00000408813 74 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 RNA5SP237-201ENST00000410414 113 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 AC022559.1-201ENST00000520905 205 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 MIR4431-201ENST00000579990 94 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 AC009779.6-201ENST00000603972 165 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 AL162730.1-201ENST00000605734 292 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
RPF1Q9H9Y2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.521-201ENST00000384560 114 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 U8.15-201ENST00000390947 134 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 AC096949.1-201ENST00000412047 152 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1219P-201ENST00000516143 112 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 AC141846.1-201ENST00000568348 142 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 MIR8066-201ENST00000617280 78 ntBASIC0.48□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.52-201ENST00000362760 96 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 RNU6-1082P-201ENST00000364574 107 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.274-201ENST00000364714 101 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 AL078595.1-201ENST00000404458 226 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 RNU4-83P-201ENST00000410863 133 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.757-201ENST00000578934 114 ntBASIC0.47□□□□□ -2.33
RPF1Q9H9Y2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.46□□□□□ -2.34
RPF1Q9H9Y2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.46□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.171-201ENST00000363760 102 ntBASIC0.46□□□□□ -2.34
RPF1Q9H9Y2 SNORA18-201ENST00000384416 132 ntBASIC0.46□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.46□□□□□ -2.34
RPF1Q9H9Y2 RNA5SP236-201ENST00000516169 116 ntBASIC0.46□□□□□ -2.34
RPF1Q9H9Y2 RNU6-349P-201ENST00000362402 107 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 RNU4-45P-201ENST00000365469 141 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 RNY1P6-201ENST00000384193 109 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 RNU6-448P-201ENST00000517052 107 ntBASIC0.45□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.44□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.233-201ENST00000364407 101 ntBASIC0.44□□□□□ -2.34
RPF1Q9H9Y2 RNU6-679P-201ENST00000391003 106 ntBASIC0.44□□□□□ -2.34
RPF1Q9H9Y2 RNA5SP144-201ENST00000410846 116 ntBASIC0.44□□□□□ -2.34
RPF1Q9H9Y2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
RPF1Q9H9Y2 RNU6-403P-201ENST00000363163 104 ntBASIC0.43□□□□□ -2.34
RPF1Q9H9Y2 RNY1P13-201ENST00000365030 105 ntBASIC0.43□□□□□ -2.34
RPF1Q9H9Y2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.470-201ENST00000384307 117 ntBASIC0.43□□□□□ -2.34
RPF1Q9H9Y2 RPL39P25-201ENST00000449384 154 ntBASIC0.43□□□□□ -2.34
RPF1Q9H9Y2 MIR4491-201ENST00000581087 68 ntBASIC0.43□□□□□ -2.34
RPF1Q9H9Y2 RNU6-312P-201ENST00000364629 107 ntBASIC0.42□□□□□ -2.34
RPF1Q9H9Y2 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
RPF1Q9H9Y2 RNU6-949P-201ENST00000384040 107 ntBASIC0.42□□□□□ -2.34
RPF1Q9H9Y2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
RPF1Q9H9Y2 RNA5SP94-201ENST00000516917 108 ntBASIC0.42□□□□□ -2.34
RPF1Q9H9Y2 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.297-201ENST00000364950 91 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 Y_RNA.489-201ENST00000384410 101 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 AC107027.2-201ENST00000512197 115 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 RNU2-60P-201ENST00000517290 128 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 MIR6082-201ENST00000613604 109 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 AC078938.1-201ENST00000620993 318 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 MIR924-201ENST00000638017 53 ntBASIC0.41□□□□□ -2.34
RPF1Q9H9Y2 RNY1P11-201ENST00000363759 113 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 RNU6-379P-201ENST00000363813 104 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 RNA5SP117-201ENST00000365294 118 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 RNU5E-9P-201ENST00000411164 104 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.644-201ENST00000459006 113 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.674-201ENST00000516362 113 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.4□□□□□ -2.35
RPF1Q9H9Y2 RNA5SP325-201ENST00000363756 130 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 RNU6-818P-201ENST00000364837 108 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.497-201ENST00000384447 98 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 Y_RNA.515-201ENST00000384535 112 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 MIR644A-201ENST00000385262 94 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 RNU6-588P-201ENST00000410281 105 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 RNU6-1086P-201ENST00000410930 100 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 RNU6-893P-201ENST00000458841 100 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 RNU7-79P-201ENST00000516082 62 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 RNU6-1271P-201ENST00000517049 105 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 MIR3658-201ENST00000636291 56 ntBASIC0.39□□□□□ -2.35
RPF1Q9H9Y2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
RPF1Q9H9Y2 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 236.7 ms