Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
PIF1Q9H611 MIR759-201ENST00000390224 91 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 SNORD124-201ENST00000459577 104 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 RNA5SP33-201ENST00000516687 98 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 U6.95-201ENST00000636931 70 ntBASIC1.35□□□□□ -2.19
PIF1Q9H611 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 SNORA18-201ENST00000384416 132 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 RNU6-1104P-201ENST00000384723 104 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 RNU6-482P-201ENST00000391068 107 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 COX6CP6-201ENST00000490840 228 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 PDCD5P2-201ENST00000507570 312 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 SNORD33.1-201ENST00000516213 88 ntBASIC1.34□□□□□ -2.19
PIF1Q9H611 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.34□□□□□ -2.19
PIF1Q9H611 RNU1-17P-201ENST00000363022 152 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 Y_RNA.198-201ENST00000364013 98 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 Y_RNA.213-201ENST00000364178 111 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 Y_RNA.470-201ENST00000384307 117 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 Y_RNA.563-201ENST00000384707 108 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 MIR1257-201ENST00000408490 117 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 AC141846.1-201ENST00000568348 142 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 MIR4524B-201ENST00000581569 115 ntBASIC1.33□□□□□ -2.2
PIF1Q9H611 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PIF1Q9H611 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 RNU6-1237P-201ENST00000384777 107 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 MIR548A3-201ENST00000385297 97 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 MTND5P34-201ENST00000568888 325 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.32□□□□□ -2.2
PIF1Q9H611 AL353997.5-201ENST00000618886 171 ntBASIC1.32□□□□□ -2.2
PIF1Q9H611 RNU6-1290P-201ENST00000362957 109 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 Y_RNA.353-201ENST00000365440 108 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 MT-TI-201ENST00000387365 69 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 SNORD77B-201ENST00000391112 67 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 RNU4-69P-201ENST00000410677 143 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 Y_RNA.649-201ENST00000459077 103 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 RNU7-35P-201ENST00000517174 62 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 MIR4771-2-201ENST00000577758 74 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 MIR4771-1-201ENST00000582617 74 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 AL670379.3-201ENST00000605040 251 ntBASIC1.31□□□□□ -2.2
PIF1Q9H611 RNU6-949P-201ENST00000384040 107 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 SNORA32-201ENST00000384072 121 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 MIR548A1-201ENST00000385041 97 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 RNU6-735P-201ENST00000410612 107 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.3□□□□□ -2.2
PIF1Q9H611 RNU6-977P-201ENST00000516411 103 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 MIR548AE2-201ENST00000583456 67 ntBASIC1.3□□□□□ -2.2
PIF1Q9H611 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
PIF1Q9H611 RNU7-6P-201ENST00000516845 62 ntBASIC1.29□□□□□ -2.2
PIF1Q9H611 MIR3163-201ENST00000581592 73 ntBASIC1.29□□□□□ -2.2
PIF1Q9H611 MIR3124-201ENST00000582636 67 ntBASIC1.29□□□□□ -2.2
PIF1Q9H611 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.29□□□□□ -2.2
PIF1Q9H611 AC023934.1-201ENST00000574529 2389 ntBASIC1.29□□□□□ -2.2
PIF1Q9H611 RNU6-1056P-201ENST00000383996 107 ntBASIC1.28□□□□□ -2.2
PIF1Q9H611 RNU6-476P-201ENST00000384726 107 ntBASIC1.28□□□□□ -2.2
PIF1Q9H611 SNORD89-201ENST00000390981 114 ntBASIC1.28□□□□□ -2.2
PIF1Q9H611 RNU6-1064P-201ENST00000410626 104 ntBASIC1.28□□□□□ -2.2
PIF1Q9H611 RNU7-185P-201ENST00000459215 60 ntBASIC1.28□□□□□ -2.2
PIF1Q9H611 AL512598.1-201ENST00000610158 273 ntBASIC1.28□□□□□ -2.2
PIF1Q9H611 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
PIF1Q9H611 Y_RNA.273-201ENST00000364703 102 ntBASIC1.27□□□□□ -2.21
PIF1Q9H611 MIR938-201ENST00000401216 83 ntBASIC1.27□□□□□ -2.21
PIF1Q9H611 Y_RNA.629-201ENST00000411368 105 ntBASIC1.27□□□□□ -2.21
PIF1Q9H611 RNU7-79P-201ENST00000516082 62 ntBASIC1.27□□□□□ -2.21
PIF1Q9H611 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
PIF1Q9H611 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
PIF1Q9H611 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PIF1Q9H611 RNY4P6-201ENST00000363667 96 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 RNU6-1144P-201ENST00000384247 104 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 MIR125B2-201ENST00000385128 89 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.26□□□□□ -2.21
PIF1Q9H611 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 MIR6129-201ENST00000616087 109 ntBASIC1.26□□□□□ -2.21
PIF1Q9H611 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
PIF1Q9H611 RNU6-834P-201ENST00000362367 110 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 SNORD116-21-201ENST00000384507 92 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 SNORD105-201ENST00000386910 85 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 SNORD93-201ENST00000408813 74 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 AC007012.1-201ENST00000567192 175 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 MIR4676-201ENST00000583078 72 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 AL359821.1-201ENST00000605519 182 ntBASIC1.25□□□□□ -2.21
PIF1Q9H611 RNU6-364P-201ENST00000384387 107 ntBASIC1.24□□□□□ -2.21
PIF1Q9H611 MIR548D2-201ENST00000384955 97 ntBASIC1.24□□□□□ -2.21
PIF1Q9H611 RNU6-447P-201ENST00000410293 104 ntBASIC1.24□□□□□ -2.21
PIF1Q9H611 RNU6-1118P-201ENST00000410382 104 ntBASIC1.24□□□□□ -2.21
PIF1Q9H611 RNU6-1076P-201ENST00000410397 104 ntBASIC1.24□□□□□ -2.21
PIF1Q9H611 RNU6-355P-201ENST00000410427 104 ntBASIC1.24□□□□□ -2.21
PIF1Q9H611 RNU6-791P-201ENST00000410467 104 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms