Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SNORA1.2-201ENST00000365189 134 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 MIR499A-201ENST00000384903 122 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 MIR934-201ENST00000401241 83 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 RNU6-795P-201ENST00000516323 103 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 SNORA44.1-201ENST00000517031 108 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 AL157834.3-201ENST00000615543 103 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 AC091304.10-201ENST00000641554 121 ntBASIC1.53□□□□□ -2.16
EBF3Q9H4W6 Y_RNA.107-201ENST00000363190 121 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 RNU6-832P-201ENST00000363319 107 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.155-201ENST00000363632 101 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.558-201ENST00000384685 113 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 SNORA26.2-201ENST00000390922 122 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 RNU7-73P-201ENST00000458743 63 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 AC107297.1-201ENST00000459991 176 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 SCARNA23-201ENST00000516060 130 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 RNU6-917P-201ENST00000516294 104 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 RNA5SP33-201ENST00000516687 98 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 MIR8055-201ENST00000610739 97 ntBASIC1.52□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.290-201ENST00000364879 114 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 SNORA32-201ENST00000384072 121 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 RNU6-439P-201ENST00000384188 106 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 RNU6-644P-201ENST00000391155 98 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 SNORA7.5-201ENST00000410672 110 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 RNU6-733P-201ENST00000410759 104 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 RNU7-53P-201ENST00000516705 60 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 MIR4694-201ENST00000578534 80 ntBASIC1.51□□□□□ -2.17
EBF3Q9H4W6 RNU4-36P-201ENST00000364294 144 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 RNU6-392P-201ENST00000364926 101 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.299-201ENST00000364973 94 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 RNU6-409P-201ENST00000384114 104 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.507-201ENST00000384500 99 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 RNU6-342P-201ENST00000384521 104 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.601-201ENST00000410500 113 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 AC090844.1-201ENST00000422019 156 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 RNU6-893P-201ENST00000458841 100 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 RNU7-61P-201ENST00000515897 61 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 SNORA74.3-201ENST00000517108 154 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 MIR4777-201ENST00000583710 86 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 MIR8074-201ENST00000615081 81 ntBASIC1.5□□□□□ -2.17
EBF3Q9H4W6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.5□□□□□ -2.17
EBF3Q9H4W6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
EBF3Q9H4W6 RNU6-170P-201ENST00000362832 104 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.220-201ENST00000364244 109 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 SNORA70.7-201ENST00000384159 133 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
EBF3Q9H4W6 RNU6-592P-201ENST00000411333 103 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 RNU6-521P-201ENST00000516663 105 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 MIR3152-201ENST00000579801 74 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 MIR8065-201ENST00000620577 100 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 MIR2052-201ENST00000636055 55 ntBASIC1.49□□□□□ -2.17
EBF3Q9H4W6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.247-201ENST00000364500 92 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 SNORA1.1-201ENST00000364671 133 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 RNA5SP173-201ENST00000364857 136 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 RNU6-1201P-201ENST00000384227 107 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 MIR653-201ENST00000385279 96 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 UBL5P1-201ENST00000507979 193 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 RNU6-162P-201ENST00000516228 103 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 AC026421.1-201ENST00000519101 163 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 AC015688.6-201ENST00000577737 104 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
EBF3Q9H4W6 RNU6-573P-201ENST00000383938 106 ntBASIC1.47□□□□□ -2.17
EBF3Q9H4W6 Y_RNA.593-201ENST00000410292 98 ntBASIC1.47□□□□□ -2.17
EBF3Q9H4W6 AC096949.1-201ENST00000412047 152 ntBASIC1.47□□□□□ -2.17
EBF3Q9H4W6 AC004941.2-201ENST00000427009 228 ntBASIC1.47□□□□□ -2.17
EBF3Q9H4W6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
EBF3Q9H4W6 MIR4764-201ENST00000580680 88 ntBASIC1.47□□□□□ -2.17
EBF3Q9H4W6 U7.3-201ENST00000616123 62 ntBASIC1.47□□□□□ -2.17
EBF3Q9H4W6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.17
EBF3Q9H4W6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.467-201ENST00000384297 102 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 MIR513A1-201ENST00000385138 129 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 RNU6-602P-201ENST00000411155 105 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.46□□□□□ -2.18
EBF3Q9H4W6 snoU13.16-201ENST00000459350 104 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 RNU7-41P-201ENST00000515917 61 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 RN7SKP12-201ENST00000516275 143 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 MIR548AO-201ENST00000579992 96 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 AC008133.2-201ENST00000624540 351 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 Z97988.1-201ENST00000637697 135 ntBASIC1.46□□□□□ -2.18
EBF3Q9H4W6 RNU6-1313P-201ENST00000362622 102 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 Y_RNA.377-201ENST00000365644 108 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 SNORD77B-201ENST00000391112 67 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 MRPL35P3-201ENST00000421557 364 ntBASIC1.45□□□□□ -2.18
EBF3Q9H4W6 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 218.3 ms