Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC130289.1-201ENST00000577321 73 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.42□□□□□ -2.34
RNF41Q9H4P4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.42□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.144-201ENST00000363521 113 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 RNU6-1082P-201ENST00000364574 107 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 SNORD93-201ENST00000408813 74 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 RNU7-70P-201ENST00000516941 66 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 AL162730.1-201ENST00000605734 292 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
RNF41Q9H4P4 RNU6-312P-201ENST00000364629 107 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 MIR489-201ENST00000384923 84 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
RNF41Q9H4P4 RNU6-1219P-201ENST00000516143 112 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 RNU6-448P-201ENST00000517052 107 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.4□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.274-201ENST00000364714 101 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNU4-16P-201ENST00000364737 141 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNY1P13-201ENST00000365030 105 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNU6-949P-201ENST00000384040 107 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 SNORA20-201ENST00000384662 132 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNA5SP237-201ENST00000410414 113 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNA5SP144-201ENST00000410846 116 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNU4-83P-201ENST00000410863 133 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 AC022559.1-201ENST00000520905 205 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 MIR4491-201ENST00000581087 68 ntBASIC0.39□□□□□ -2.35
RNF41Q9H4P4 RNU6-1020P-201ENST00000363684 107 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.233-201ENST00000364407 101 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 RNY1P6-201ENST00000384193 109 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 SNORA18-201ENST00000384416 132 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.521-201ENST00000384560 114 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
RNF41Q9H4P4 MIR6082-201ENST00000613604 109 ntBASIC0.38□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 SNORD115-2-201ENST00000362842 82 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 SNORD115-20-201ENST00000365099 82 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNU5E-9P-201ENST00000411164 104 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNU6-893P-201ENST00000458841 100 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNU7-121P-201ENST00000516604 62 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 RNU2-60P-201ENST00000517290 128 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 MIR3678-201ENST00000578455 94 ntBASIC0.37□□□□□ -2.35
RNF41Q9H4P4 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
RNF41Q9H4P4 RNY1P11-201ENST00000363759 113 ntBASIC0.36□□□□□ -2.35
RNF41Q9H4P4 Y_RNA.497-201ENST00000384447 98 ntBASIC0.36□□□□□ -2.35
RNF41Q9H4P4 RNU7-79P-201ENST00000516082 62 ntBASIC0.36□□□□□ -2.35
RNF41Q9H4P4 RNU7-35P-201ENST00000517174 62 ntBASIC0.36□□□□□ -2.35
RNF41Q9H4P4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.36□□□□□ -2.35
RNF41Q9H4P4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RNF41Q9H4P4 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 RNU6-379P-201ENST00000363813 104 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 AC107027.2-201ENST00000512197 115 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.35□□□□□ -2.35
RNF41Q9H4P4 AC141273.2-201ENST00000618989 130 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 uc_338.16-201ENST00000621804 95 ntBASIC0.35□□□□□ -2.35
RNF41Q9H4P4 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.120-201ENST00000363304 110 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 SNORA36.1-201ENST00000363424 132 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 RNA5SP117-201ENST00000365294 118 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.337-201ENST00000365312 102 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.489-201ENST00000384410 101 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.515-201ENST00000384535 112 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 AL512326.2-201ENST00000426359 151 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.674-201ENST00000516362 113 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 RNU6-765P-201ENST00000516916 99 ntBASIC0.34□□□□□ -2.36
RNF41Q9H4P4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.34□□□□□ -2.36
RNF41Q9H4P4 RNU6-403P-201ENST00000363163 104 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 RNU4-84P-201ENST00000364200 139 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 MT-TG-201ENST00000387429 68 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 RNU6-239P-201ENST00000390990 99 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 SNORA75.5-201ENST00000391291 81 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 AL078595.1-201ENST00000404458 226 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 RNU6-588P-201ENST00000410281 105 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 RNU2-35P-201ENST00000516446 142 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 AC133485.4-201ENST00000561835 220 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 AC072026.1-201ENST00000605023 201 ntBASIC0.33□□□□□ -2.36
RNF41Q9H4P4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.33□□□□□ -2.36
RNF41Q9H4P4 RNU6-818P-201ENST00000364837 108 ntBASIC0.32□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.297-201ENST00000364950 91 ntBASIC0.32□□□□□ -2.36
RNF41Q9H4P4 Y_RNA.357-201ENST00000365487 109 ntBASIC0.32□□□□□ -2.36
RNF41Q9H4P4 MIR644A-201ENST00000385262 94 ntBASIC0.32□□□□□ -2.36
RNF41Q9H4P4 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms