Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 SNORA4-201ENST00000584302 138 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 MIR526A1-201ENST00000384897 85 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 SNORA26.6-201ENST00000391256 115 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 AC004965.1-201ENST00000413033 213 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 RPL39P39-201ENST00000455840 151 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 RN7SL274P-201ENST00000492268 272 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 SNRPGP19-201ENST00000603826 189 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 AL512310.12-203ENST00000640543 90 ntBASIC2.03□□□□□ -2.08
SEMA4AQ9H3S1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.219-201ENST00000364232 113 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 SNORA18-201ENST00000384416 132 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-1319P-201ENST00000390855 104 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-747P-201ENST00000390928 104 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-1307P-201ENST00000391012 103 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-241P-201ENST00000391148 104 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-177P-201ENST00000411257 104 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 AL161935.2-201ENST00000414627 60 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 MIR6504-201ENST00000613520 61 ntBASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
SEMA4AQ9H3S1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-342P-201ENST00000384521 104 ntBASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 MIR376B-201ENST00000614515 100 ntBASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 MIR6717-201ENST00000622747 73 ntBASIC2.01□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.10-201ENST00000362371 110 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.95-201ENST00000363079 95 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-787P-201ENST00000384032 107 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.540-201ENST00000384638 111 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 RPS29P29-201ENST00000456396 171 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 SNORD123-201ENST00000459473 70 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 UBL5P1-201ENST00000507979 193 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.685-201ENST00000516532 108 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 AC243994.1-201ENST00000618627 109 ntBASIC2□□□□□ -2.09
SEMA4AQ9H3S1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SEMA4AQ9H3S1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-203P-201ENST00000384038 104 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 RNY1P4-201ENST00000384595 115 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 SNORD77B-201ENST00000391112 67 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 RNU4-62P-201ENST00000410125 130 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 MIR8074-201ENST00000615081 81 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 MIR6841-201ENST00000637129 72 ntBASIC1.99□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 Y_RNA.313-201ENST00000365095 103 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 SNORD115-35-201ENST00000365122 82 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-1276P-201ENST00000365372 104 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-42P-201ENST00000384165 107 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 AL451046.2-201ENST00000403074 277 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 MIR1276-201ENST00000408707 83 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-322P-201ENST00000516010 103 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 FAM106DP-201ENST00000586416 501 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 RNU6-86P-201ENST00000606534 107 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 AL020996.3-201ENST00000606617 222 ntBASIC1.98□□□□□ -2.09
SEMA4AQ9H3S1 SNORD115-2-201ENST00000362842 82 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 SNORD45B-201ENST00000364617 72 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 SNORA1.1-201ENST00000364671 133 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 SNORD115-20-201ENST00000365099 82 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 MIR3152-201ENST00000579801 74 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 BX248123.2-201ENST00000606318 124 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 AL512598.1-201ENST00000610158 273 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 AC105081.1-201ENST00000617727 106 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 SEPT14P17-201ENST00000617978 177 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.97□□□□□ -2.09
SEMA4AQ9H3S1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
SEMA4AQ9H3S1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SEMA4AQ9H3S1 SNORA70.7-201ENST00000384159 133 ntBASIC1.96□□□□□ -2.1
SEMA4AQ9H3S1 AC096949.1-201ENST00000412047 152 ntBASIC1.96□□□□□ -2.1
SEMA4AQ9H3S1 AC245047.7-201ENST00000440265 293 ntBASIC1.96□□□□□ -2.1
SEMA4AQ9H3S1 RNU7-53P-201ENST00000516705 60 ntBASIC1.96□□□□□ -2.1
SEMA4AQ9H3S1 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
SEMA4AQ9H3S1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 RNU6-219P-201ENST00000364728 107 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 Y_RNA.437-201ENST00000384113 113 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 RNU6-1237P-201ENST00000384777 107 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 MIR513A1-201ENST00000385138 129 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 RNU6-887P-201ENST00000410660 100 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 AC090844.1-201ENST00000422019 156 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 Y_RNA.705-201ENST00000516862 110 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 MIR5588-201ENST00000581890 63 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 AC103810.7-201ENST00000607821 91 ntBASIC1.95□□□□□ -2.1
SEMA4AQ9H3S1 Y_RNA.221-201ENST00000364248 96 ntBASIC1.94□□□□□ -2.1
SEMA4AQ9H3S1 RNU6-392P-201ENST00000364926 101 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms