Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC090582.1-201ENST00000636321 199 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 AC132825.6-201ENST00000638861 357 ntBASIC-1.31□□□□□ -2.62
TRIM4Q9C037 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 RNY3P11-201ENST00000364153 102 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 SNORD114-17-201ENST00000364699 75 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 RNU6-449P-201ENST00000383914 107 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 MIR548K-201ENST00000408406 116 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 MIR548F5-201ENST00000408421 86 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 SNORD18.2-201ENST00000459604 70 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 RNU6-120P-201ENST00000516077 103 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 AC144568.1-201ENST00000520139 137 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 AP003733.2-201ENST00000529409 171 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 MIR5591-201ENST00000578248 65 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 MIR4520-1-201ENST00000582609 70 ntBASIC-1.32□□□□□ -2.62
TRIM4Q9C037 RNU4-80P-201ENST00000363200 141 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 MIR599-201ENST00000385069 95 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 RNU2-66P-201ENST00000410650 161 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 RNU6-370P-201ENST00000411008 104 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 RNU7-55P-201ENST00000459426 62 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 SERF1AP1-201ENST00000514575 187 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 RNU7-79P-201ENST00000516082 62 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 RNU7-110P-201ENST00000516891 62 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 RNU7-4P-201ENST00000516961 62 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.33□□□□□ -2.62
TRIM4Q9C037 YWHAEP2-201ENST00000580066 112 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 MIR3920-201ENST00000581751 86 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 AC091932.4-201ENST00000623386 200 ntBASIC-1.33□□□□□ -2.62
TRIM4Q9C037 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 MTND3P8-201ENST00000412909 339 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 AC097635.1-201ENST00000450678 155 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 RNU7-80P-201ENST00000459562 61 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 RNU6-126P-201ENST00000516685 103 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 MIR6854-201ENST00000614935 69 ntBASIC-1.34□□□□□ -2.62
TRIM4Q9C037 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 MIR889-201ENST00000401280 79 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.35□□□□□ -2.63
TRIM4Q9C037 AC016907.1-201ENST00000419483 435 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 RNU6-397P-201ENST00000516226 104 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 RNU7-13P-201ENST00000516413 62 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 AC138207.3-201ENST00000585289 166 ntBASIC-1.35□□□□□ -2.63
TRIM4Q9C037 RNY1P2-201ENST00000364820 117 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 RPS29P25-201ENST00000481709 171 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 AC145423.2-201ENST00000610631 239 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 U2.1-201ENST00000618978 145 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 MIR376A2-201ENST00000636782 80 ntBASIC-1.36□□□□□ -2.63
TRIM4Q9C037 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 MIR628-201ENST00000385229 95 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 RNU6-287P-201ENST00000516230 98 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 RNU6-415P-201ENST00000516252 97 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 MTND5P40-201ENST00000559945 246 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 AC098479.1-201ENST00000609225 154 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 U4.1-201ENST00000620349 87 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 AC021613.1-201ENST00000623880 111 ntBASIC-1.37□□□□□ -2.63
TRIM4Q9C037 MIR20A-201ENST00000362279 71 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 MIR367-201ENST00000362299 68 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 SNORD115-25-201ENST00000362619 82 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 RNU6-973P-201ENST00000364690 107 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 RNU6-763P-201ENST00000390865 106 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.38□□□□□ -2.63
TRIM4Q9C037 AC107027.2-201ENST00000512197 115 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 MTCO2P24-201ENST00000515611 426 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 RNU6-479P-201ENST00000516348 105 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 MIR3611-201ENST00000584484 83 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
TRIM4Q9C037 RN7SKP299-201ENST00000606679 301 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 AC011603.4-201ENST00000611325 277 ntBASIC-1.38□□□□□ -2.63
TRIM4Q9C037 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 RNU4-70P-201ENST00000384579 139 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 SNORA49-201ENST00000386157 136 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.39□□□□□ -2.63
TRIM4Q9C037 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 RNU6-264P-201ENST00000517134 104 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 SNORA40.17-201ENST00000517256 115 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 AL442663.2-201ENST00000554385 511 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 AC145350.1-201ENST00000567426 208 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 Z99129.1-201ENST00000612510 255 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 AC015540.1-201ENST00000615828 501 ntBASIC-1.39□□□□□ -2.63
TRIM4Q9C037 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.4□□□□□ -2.63
TRIM4Q9C037 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms