Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SNORD115-17-201ENST00000364612 82 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNU6-1319P-201ENST00000390855 104 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNU6-747P-201ENST00000390928 104 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNU6-241P-201ENST00000391148 104 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNY4P29-201ENST00000410801 97 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNU6-177P-201ENST00000411257 104 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNU2-13P-201ENST00000515909 113 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 FAM106DP-201ENST00000586416 501 ntBASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LRFN3Q9BTN0 Y_RNA.93-201ENST00000363066 109 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.220-201ENST00000364244 109 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU4-36P-201ENST00000364294 144 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU6-60P-201ENST00000364792 103 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.299-201ENST00000364973 94 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.388-201ENST00000383919 113 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 MIR520E-201ENST00000384867 87 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 SNORA26.2-201ENST00000390922 122 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RPS3AP1-201ENST00000413190 320 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU7-67P-201ENST00000459003 62 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU7-113P-201ENST00000459273 62 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RPS29P1-201ENST00000465274 159 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RPL30P7-201ENST00000479312 323 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU6-958P-201ENST00000516995 106 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU6-844P-201ENST00000517175 102 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 MIR4421-201ENST00000578133 69 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 MIR5002-201ENST00000584713 97 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 AL442128.1-201ENST00000615151 90 ntBASIC1.77□□□□□ -2.13
LRFN3Q9BTN0 RNU6-363P-201ENST00000362895 105 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 RNY3P2-201ENST00000362918 102 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.107-201ENST00000363190 121 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 RNU1-93P-201ENST00000364704 169 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 SNORA24-201ENST00000384096 131 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 SNORD28B-201ENST00000390993 75 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 SNORA26.6-201ENST00000391256 115 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 RNU4-69P-201ENST00000410677 143 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 AC027119.1-201ENST00000440877 241 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 RNU6-717P-201ENST00000459076 104 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 SCARNA23-201ENST00000516060 130 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 MIR3152-201ENST00000579801 74 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 MIR548AR-201ENST00000582191 57 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 MALAT1.1-201ENST00000618249 95 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 MIR6841-201ENST00000637129 72 ntBASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
LRFN3Q9BTN0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 SNORA22.1-201ENST00000362701 134 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 SNORD115-2-201ENST00000362842 82 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.155-201ENST00000363632 101 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 SNORD115-20-201ENST00000365099 82 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.342-201ENST00000365352 113 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.360-201ENST00000365512 102 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 RPS29P29-201ENST00000456396 171 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 RNU6-893P-201ENST00000458841 100 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 SNORD123-201ENST00000459473 70 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 RNU7-53P-201ENST00000516705 60 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 MIR151B-201ENST00000584249 96 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 MIR4791-201ENST00000607666 84 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.75□□□□□ -2.13
LRFN3Q9BTN0 RNU4-67P-201ENST00000364569 141 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU6-409P-201ENST00000384114 104 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 MIR605-201ENST00000385078 83 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 MIR577-201ENST00000385196 96 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU6-913P-201ENST00000390913 95 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 Y_RNA.601-201ENST00000410500 113 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU6-733P-201ENST00000410759 104 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 AL353813.1-201ENST00000440700 253 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU7-73P-201ENST00000458743 63 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU6-917P-201ENST00000516294 104 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU1-40P-201ENST00000516816 164 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU1-97P-201ENST00000516872 164 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 MIR4694-201ENST00000578534 80 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 MIR548AE2-201ENST00000583456 67 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 AC243994.1-201ENST00000618627 109 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 MIR6788-201ENST00000618842 66 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 MIR6717-201ENST00000622747 73 ntBASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LRFN3Q9BTN0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 RNU6-832P-201ENST00000363319 107 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 MIR1270-201ENST00000459320 83 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 RNA5SP33-201ENST00000516687 98 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 FAM71BP1-201ENST00000604431 523 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 AC062037.1-201ENST00000605302 128 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 AL353770.2-201ENST00000620024 78 ntBASIC1.73□□□□□ -2.13
LRFN3Q9BTN0 ZNF209P-201ENST00000593450 2304 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 2099.3 ms