Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 Y_RNA.690-201ENST00000516603 95 ntBASIC0.97□□□□□ -2.25
CLSTN3Q9BQT9 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
CLSTN3Q9BQT9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
CLSTN3Q9BQT9 RNU6-94P-201ENST00000607728 107 ntBASIC0.97□□□□□ -2.25
CLSTN3Q9BQT9 MIR6841-201ENST00000637129 72 ntBASIC0.97□□□□□ -2.25
CLSTN3Q9BQT9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.97□□□□□ -2.25
CLSTN3Q9BQT9 SNORA22.1-201ENST00000362701 134 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-934P-201ENST00000365154 107 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.488-201ENST00000384403 102 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 SNORD12C-201ENST00000386307 89 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-346P-201ENST00000516288 111 ntBASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-915P-201ENST00000364943 103 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-690P-201ENST00000365242 106 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNY1P5-201ENST00000383890 115 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-1062P-201ENST00000383908 107 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.420-201ENST00000384043 110 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 MT-TF-201ENST00000387314 71 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNA5SP237-201ENST00000410414 113 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNA5SP272-201ENST00000516095 111 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 MIR6740-201ENST00000618268 113 ntBASIC0.95□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 MIR1827-201ENST00000408549 66 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 AL022718.1-201ENST00000412004 84 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 RPS26P5-201ENST00000418544 335 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 RNU5E-3P-201ENST00000515913 68 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-240P-201ENST00000516098 97 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-426P-201ENST00000516464 97 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.757-201ENST00000578934 114 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 AP001340.1-201ENST00000624405 217 ntBASIC0.94□□□□□ -2.26
CLSTN3Q9BQT9 SNORD89-201ENST00000390981 114 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 RNA5SP144-201ENST00000410846 116 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 snoU13.21-201ENST00000459368 105 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 RNU6-1258P-201ENST00000516911 111 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 AP001328.1-201ENST00000528550 176 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 MIR3121-201ENST00000579680 77 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 uc_338.6-201ENST00000613544 171 ntBASIC0.93□□□□□ -2.26
CLSTN3Q9BQT9 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 MIR563-201ENST00000385080 79 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 RPL39P25-201ENST00000449384 154 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.692-201ENST00000516627 105 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 AC133485.4-201ENST00000561835 220 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 AC138907.4-201ENST00000570107 226 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 MIR4305-201ENST00000583252 102 ntBASIC0.92□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.91□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.343-201ENST00000365354 112 ntBASIC0.91□□□□□ -2.26
CLSTN3Q9BQT9 AC108081.1-201ENST00000604358 221 ntBASIC0.91□□□□□ -2.26
CLSTN3Q9BQT9 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
CLSTN3Q9BQT9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.91□□□□□ -2.26
CLSTN3Q9BQT9 AC010332.2-201ENST00000613083 1904 ntBASIC0.91□□□□□ -2.26
CLSTN3Q9BQT9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.26
CLSTN3Q9BQT9 Y_RNA.366-201ENST00000365540 102 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.568-201ENST00000384742 113 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 SNORD83.1-201ENST00000411362 77 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-977P-201ENST00000516411 103 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 RNU2-35P-201ENST00000516446 142 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 MIR4771-2-201ENST00000577758 74 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 MIR4771-1-201ENST00000582617 74 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 MIR3133-201ENST00000583157 78 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 AC021443.1-201ENST00000604478 211 ntBASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-774P-201ENST00000363238 107 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 MIR193B-201ENST00000384907 83 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 MIR1257-201ENST00000408490 117 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 AL512326.2-201ENST00000426359 151 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 RNU7-113P-201ENST00000459273 62 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 AC113410.1-201ENST00000505029 247 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 AL662814.1-201ENST00000617364 121 ntBASIC0.89□□□□□ -2.27
CLSTN3Q9BQT9 MIR30D-201ENST00000362283 70 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.114-201ENST00000363265 113 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.470-201ENST00000384307 117 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 SNORD105-201ENST00000386910 85 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 MTND4LP9-201ENST00000427694 174 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 RNU7-164P-201ENST00000459221 62 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 Y_RNA.703-201ENST00000516846 111 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 MIR1273G-201ENST00000577677 100 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 U7.2-201ENST00000607576 63 ntBASIC0.88□□□□□ -2.27
CLSTN3Q9BQT9 SNORD115-2-201ENST00000362842 82 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 SNORD115-20-201ENST00000365099 82 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-746P-201ENST00000384112 109 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 SNORA18-201ENST00000384416 132 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 MIR938-201ENST00000401216 83 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-257P-201ENST00000410238 98 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 AC015818.7-201ENST00000428754 109 ntBASIC0.87□□□□□ -2.27
CLSTN3Q9BQT9 AC087499.7-201ENST00000441958 109 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms