Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RNU6-559P-201ENST00000516151 98 ntBASIC-0.98□□□□□ -2.57
CCL13Q99616 RNU7-137P-201ENST00000516788 62 ntBASIC-0.98□□□□□ -2.57
CCL13Q99616 PART1_1.1-201ENST00000611761 217 ntBASIC-0.98□□□□□ -2.57
CCL13Q99616 AC093726.3-201ENST00000637588 150 ntBASIC-0.98□□□□□ -2.57
CCL13Q99616 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 RNY3P5-201ENST00000384127 102 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 SNORA53-201ENST00000391141 249 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.99□□□□□ -2.57
CCL13Q99616 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 RNU6-718P-201ENST00000516166 105 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 RNU6-358P-201ENST00000516564 75 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 SNORA20.3-201ENST00000516880 132 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 AC040926.1-201ENST00000530195 238 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
CCL13Q99616 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 MIR4436A-201ENST00000585278 85 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 AL008718.3-201ENST00000610217 321 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 AL606534.2-204ENST00000635008 178 ntBASIC-0.99□□□□□ -2.57
CCL13Q99616 RNU4-90P-201ENST00000362773 141 ntBASIC-1□□□□□ -2.57
CCL13Q99616 SNORD114-29-201ENST00000364819 70 ntBASIC-1□□□□□ -2.57
CCL13Q99616 Y_RNA.470-201ENST00000384307 117 ntBASIC-1□□□□□ -2.57
CCL13Q99616 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1□□□□□ -2.57
CCL13Q99616 AL731563.1-201ENST00000442202 214 ntBASIC-1□□□□□ -2.57
CCL13Q99616 AC069439.1-201ENST00000494739 167 ntBASIC-1□□□□□ -2.57
CCL13Q99616 AC074198.2-201ENST00000508153 258 ntBASIC-1□□□□□ -2.57
CCL13Q99616 RNU6-720P-201ENST00000516363 108 ntBASIC-1□□□□□ -2.57
CCL13Q99616 RNU7-13P-201ENST00000516413 62 ntBASIC-1□□□□□ -2.57
CCL13Q99616 RNU6-1046P-201ENST00000516538 107 ntBASIC-1□□□□□ -2.57
CCL13Q99616 SNORD67.1-201ENST00000516618 108 ntBASIC-1□□□□□ -2.57
CCL13Q99616 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 RNU4-24P-201ENST00000364565 139 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 MIR548F1-201ENST00000408667 84 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 RNU4-63P-201ENST00000411313 118 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
CCL13Q99616 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 AC113139.1-201ENST00000605049 239 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 MIR376A1-201ENST00000616574 68 ntBASIC-1.01□□□□□ -2.57
CCL13Q99616 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 SNORD114-10-201ENST00000363409 72 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 RNY4P3-201ENST00000365254 95 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 SNORA32-201ENST00000384072 121 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 RNU6-662P-201ENST00000384253 104 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 AL603914.1-201ENST00000401964 204 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 MTND4LP30-201ENST00000454092 297 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 RNU7-113P-201ENST00000459273 62 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 RNA5SP33-201ENST00000516687 98 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 RNA5SP169-201ENST00000517268 117 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 AL365205.2-201ENST00000594586 68 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 SNORD58B-201ENST00000607313 66 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 AC069503.3-201ENST00000618674 145 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 snoU18.1-201ENST00000629629 71 ntBASIC-1.02□□□□□ -2.57
CCL13Q99616 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 MT-TT-201ENST00000387460 66 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 RNU6-735P-201ENST00000410612 107 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 RNA5SP476-201ENST00000516613 103 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 RNU6-175P-201ENST00000516896 107 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 MTND5P40-201ENST00000559945 246 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 YWHAEP2-201ENST00000580066 112 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 AL359881.1-201ENST00000602916 267 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 AC104985.2-201ENST00000620598 500 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 MTND4LP32-201ENST00000636111 270 ntBASIC-1.03□□□□□ -2.57
CCL13Q99616 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 SNORD114-15-201ENST00000364687 72 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 RNU1-115P-201ENST00000365329 160 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 SNORD116-2-201ENST00000384274 95 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 SNORD116-6-201ENST00000384711 96 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 MIR204-201ENST00000385200 110 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 RNA5SP144-201ENST00000410846 116 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.04□□□□□ -2.58
CCL13Q99616 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.04□□□□□ -2.58
CCL13Q99616 SNORA25.1-201ENST00000362326 128 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 SNORD115-2-201ENST00000362842 82 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 SNORD115-20-201ENST00000365099 82 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 SNORD81.2-201ENST00000365153 76 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 MIR539-201ENST00000365690 78 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 RNU6-138P-201ENST00000515952 107 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 AC026407.1-201ENST00000518369 204 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 IGKV1-22-201ENST00000524313 326 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 MIR4500-201ENST00000579472 76 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 MIR548AX-201ENST00000580117 73 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 AC006504.6-201ENST00000590142 199 ntBASIC-1.05□□□□□ -2.58
CCL13Q99616 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms