Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RNU6-1336P-201ENST00000383886 109 ntBASIC0.5□□□□□ -2.33
NDNQ99608 RNU4-83P-201ENST00000410863 133 ntBASIC0.5□□□□□ -2.33
NDNQ99608 RNU6-1086P-201ENST00000410930 100 ntBASIC0.5□□□□□ -2.33
NDNQ99608 Y_RNA.793-201ENST00000411222 111 ntBASIC0.5□□□□□ -2.33
NDNQ99608 MTATP6P21-201ENST00000440681 189 ntBASIC0.5□□□□□ -2.33
NDNQ99608 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
NDNQ99608 RNA5SP236-201ENST00000516169 116 ntBASIC0.5□□□□□ -2.33
NDNQ99608 Y_RNA.757-201ENST00000578934 114 ntBASIC0.5□□□□□ -2.33
NDNQ99608 AC011603.4-201ENST00000611325 277 ntBASIC0.5□□□□□ -2.33
NDNQ99608 RNU6-1082P-201ENST00000364574 107 ntBASIC0.49□□□□□ -2.33
NDNQ99608 RNU4-16P-201ENST00000364737 141 ntBASIC0.49□□□□□ -2.33
NDNQ99608 RNU6-200P-201ENST00000364743 107 ntBASIC0.49□□□□□ -2.33
NDNQ99608 RNU6-1318P-201ENST00000365389 103 ntBASIC0.49□□□□□ -2.33
NDNQ99608 RNU6-949P-201ENST00000384040 107 ntBASIC0.49□□□□□ -2.33
NDNQ99608 SNORA18-201ENST00000384416 132 ntBASIC0.49□□□□□ -2.33
NDNQ99608 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
NDNQ99608 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
NDNQ99608 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
NDNQ99608 RNU7-121P-201ENST00000516604 62 ntBASIC0.49□□□□□ -2.33
NDNQ99608 Y_RNA.700-201ENST00000516806 100 ntBASIC0.49□□□□□ -2.33
NDNQ99608 RNU6-448P-201ENST00000517052 107 ntBASIC0.49□□□□□ -2.33
NDNQ99608 AP002392.1-201ENST00000537692 208 ntBASIC0.49□□□□□ -2.33
NDNQ99608 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
NDNQ99608 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
NDNQ99608 RNU4-84P-201ENST00000364200 139 ntBASIC0.48□□□□□ -2.33
NDNQ99608 RNA5SP117-201ENST00000365294 118 ntBASIC0.48□□□□□ -2.33
NDNQ99608 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
NDNQ99608 MIR518E-201ENST00000385252 88 ntBASIC0.48□□□□□ -2.33
NDNQ99608 U8.15-201ENST00000390947 134 ntBASIC0.48□□□□□ -2.33
NDNQ99608 RNA5SP144-201ENST00000410846 116 ntBASIC0.48□□□□□ -2.33
NDNQ99608 RNA5SP247-201ENST00000411181 105 ntBASIC0.48□□□□□ -2.33
NDNQ99608 AL022718.1-201ENST00000412004 84 ntBASIC0.48□□□□□ -2.33
NDNQ99608 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
NDNQ99608 AC022559.1-201ENST00000520905 205 ntBASIC0.48□□□□□ -2.33
NDNQ99608 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
NDNQ99608 Y_RNA.240-201ENST00000364469 95 ntBASIC0.47□□□□□ -2.33
NDNQ99608 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.47□□□□□ -2.33
NDNQ99608 RNA5SP220-201ENST00000516298 104 ntBASIC0.47□□□□□ -2.33
NDNQ99608 AP003327.1-201ENST00000529684 127 ntBASIC0.47□□□□□ -2.33
NDNQ99608 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.47□□□□□ -2.33
NDNQ99608 MIR8066-201ENST00000617280 78 ntBASIC0.47□□□□□ -2.33
NDNQ99608 AC078938.1-201ENST00000620993 318 ntBASIC0.47□□□□□ -2.33
NDNQ99608 Y_RNA.42-201ENST00000362660 108 ntBASIC0.46□□□□□ -2.34
NDNQ99608 SNORD115-2-201ENST00000362842 82 ntBASIC0.46□□□□□ -2.34
NDNQ99608 SNORD115-20-201ENST00000365099 82 ntBASIC0.46□□□□□ -2.34
NDNQ99608 Y_RNA.497-201ENST00000384447 98 ntBASIC0.46□□□□□ -2.34
NDNQ99608 snosnR66.1-201ENST00000391095 99 ntBASIC0.46□□□□□ -2.34
NDNQ99608 RNU7-120P-201ENST00000459334 63 ntBASIC0.46□□□□□ -2.34
NDNQ99608 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
NDNQ99608 RNU6-1258P-201ENST00000516911 111 ntBASIC0.46□□□□□ -2.34
NDNQ99608 RNU6-388P-201ENST00000517012 105 ntBASIC0.46□□□□□ -2.34
NDNQ99608 RNU6-389P-201ENST00000517048 105 ntBASIC0.46□□□□□ -2.34
NDNQ99608 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.46□□□□□ -2.34
NDNQ99608 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
NDNQ99608 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
NDNQ99608 Y_RNA.171-201ENST00000363760 102 ntBASIC0.45□□□□□ -2.34
NDNQ99608 RNY1P13-201ENST00000365030 105 ntBASIC0.45□□□□□ -2.34
NDNQ99608 RNY1P8-201ENST00000383970 114 ntBASIC0.45□□□□□ -2.34
NDNQ99608 RNU6-342P-201ENST00000384521 104 ntBASIC0.45□□□□□ -2.34
NDNQ99608 RNU7-113P-201ENST00000459273 62 ntBASIC0.45□□□□□ -2.34
NDNQ99608 RNU6-765P-201ENST00000516916 99 ntBASIC0.45□□□□□ -2.34
NDNQ99608 DNAJC19P2-201ENST00000593340 302 ntBASIC0.45□□□□□ -2.34
NDNQ99608 MIR6082-201ENST00000613604 109 ntBASIC0.45□□□□□ -2.34
NDNQ99608 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
NDNQ99608 Y_RNA.29-201ENST00000362570 113 ntBASIC0.44□□□□□ -2.34
NDNQ99608 RNU6-403P-201ENST00000363163 104 ntBASIC0.44□□□□□ -2.34
NDNQ99608 RNU6-690P-201ENST00000365242 106 ntBASIC0.44□□□□□ -2.34
NDNQ99608 SNORD18B-201ENST00000365659 72 ntBASIC0.44□□□□□ -2.34
NDNQ99608 Y_RNA.588-201ENST00000391254 102 ntBASIC0.44□□□□□ -2.34
NDNQ99608 RNU6-588P-201ENST00000410281 105 ntBASIC0.44□□□□□ -2.34
NDNQ99608 RNU6-1135P-201ENST00000411083 103 ntBASIC0.44□□□□□ -2.34
NDNQ99608 RNU7-79P-201ENST00000516082 62 ntBASIC0.44□□□□□ -2.34
NDNQ99608 RNU7-35P-201ENST00000517174 62 ntBASIC0.44□□□□□ -2.34
NDNQ99608 MIR4491-201ENST00000581087 68 ntBASIC0.44□□□□□ -2.34
NDNQ99608 Y_RNA.13-201ENST00000362403 112 ntBASIC0.43□□□□□ -2.34
NDNQ99608 Y_RNA.441-201ENST00000384123 112 ntBASIC0.43□□□□□ -2.34
NDNQ99608 Y_RNA.785-201ENST00000384290 109 ntBASIC0.43□□□□□ -2.34
NDNQ99608 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
NDNQ99608 RNU6-138P-201ENST00000515952 107 ntBASIC0.43□□□□□ -2.34
NDNQ99608 Y_RNA.662-201ENST00000516028 97 ntBASIC0.43□□□□□ -2.34
NDNQ99608 RNA5SP33-201ENST00000516687 98 ntBASIC0.43□□□□□ -2.34
NDNQ99608 MIR4305-201ENST00000583252 102 ntBASIC0.43□□□□□ -2.34
NDNQ99608 AL078603.1-201ENST00000603824 313 ntBASIC0.43□□□□□ -2.34
NDNQ99608 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
NDNQ99608 uc_338.16-201ENST00000621804 95 ntBASIC0.43□□□□□ -2.34
NDNQ99608 Y_RNA.120-201ENST00000363304 110 ntBASIC0.42□□□□□ -2.34
NDNQ99608 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
NDNQ99608 SNORD37.2-201ENST00000391075 66 ntBASIC0.42□□□□□ -2.34
NDNQ99608 AC096949.1-201ENST00000412047 152 ntBASIC0.42□□□□□ -2.34
NDNQ99608 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
NDNQ99608 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
NDNQ99608 Y_RNA.174-201ENST00000363781 105 ntBASIC0.41□□□□□ -2.34
NDNQ99608 Y_RNA.257-201ENST00000364596 102 ntBASIC0.41□□□□□ -2.34
NDNQ99608 Y_RNA.470-201ENST00000384307 117 ntBASIC0.41□□□□□ -2.34
NDNQ99608 Y_RNA.531-201ENST00000384589 121 ntBASIC0.41□□□□□ -2.34
NDNQ99608 Y_RNA.584-201ENST00000391090 114 ntBASIC0.41□□□□□ -2.34
NDNQ99608 RNU6-861P-201ENST00000516745 106 ntBASIC0.41□□□□□ -2.34
NDNQ99608 RNA5SP94-201ENST00000516917 108 ntBASIC0.41□□□□□ -2.34
NDNQ99608 AL589743.1-201ENST00000551932 2712 ntBASIC0.4□□□□□ -2.35
NDNQ99608 RNU6-42P-201ENST00000384165 107 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms