Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 AL021921.1-201ENST00000442774 93 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 RNU7-24P-201ENST00000458867 62 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 RNU6-668P-201ENST00000364180 107 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 MIR1254-1-201ENST00000408257 97 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 AC104563.1-201ENST00000476147 376 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 RNU6-645P-201ENST00000364649 106 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 RNU6-159P-201ENST00000391080 106 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 SNORA25.10-201ENST00000515926 124 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 MTND1P5-201ENST00000517906 940 ntBASIC-3.77□□□□□ -3.01
VPS13AQ96RL7 SNORD101-201ENST00000384027 73 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 AL353193.1-201ENST00000421444 268 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 MTCO2P5-201ENST00000422621 426 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 AL391262.2-201ENST00000622466 494 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 RNU6-1254P-201ENST00000391266 104 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 UBE2V1P7-201ENST00000446395 340 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 MTATP6P15-201ENST00000527233 835 ntBASIC-3.78□□□□□ -3.01
VPS13AQ96RL7 MTND2P31-201ENST00000512602 616 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 MIR548AG1-201ENST00000579932 66 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 VN1R91P-201ENST00000594377 169 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 AC245297.2-201ENST00000610119 565 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 U6.100-201ENST00000636230 99 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 RNU6-626P-201ENST00000363354 107 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 RNU6-1321P-201ENST00000390905 107 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 RNA5SP449-201ENST00000516871 130 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 Y_RNA.415-201ENST00000384012 112 ntBASIC-3.79□□□□□ -3.02
VPS13AQ96RL7 snoU13.6-201ENST00000458785 104 ntBASIC-3.8□□□□□ -3.02
VPS13AQ96RL7 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.8□□□□□ -3.02
VPS13AQ96RL7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-3.8□□□□□ -3.02
VPS13AQ96RL7 RNU6-247P-201ENST00000362636 107 ntBASIC-3.8□□□□□ -3.02
VPS13AQ96RL7 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.8□□□□□ -3.02
VPS13AQ96RL7 RNU6-801P-201ENST00000364087 105 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 RNU6-260P-201ENST00000384092 107 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 MTND2P6-201ENST00000455337 1030 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 RNU7-25P-201ENST00000516544 62 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 RNU7-35P-201ENST00000517174 62 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 MIR3146-201ENST00000580367 79 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 AL606534.2-204ENST00000635008 178 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 RNU6-867P-201ENST00000364956 107 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 MIR578-201ENST00000384828 96 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 EEF1A1P40-201ENST00000412883 573 ntBASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-3.81□□□□□ -3.02
VPS13AQ96RL7 Y_RNA.237-201ENST00000364439 102 ntBASIC-3.82□□□□□ -3.02
VPS13AQ96RL7 SNORD115-45-201ENST00000391078 81 ntBASIC-3.83□□□□□ -3.02
VPS13AQ96RL7 RNU6-456P-201ENST00000384493 107 ntBASIC-3.83□□□□□ -3.02
VPS13AQ96RL7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-3.83□□□□□ -3.02
VPS13AQ96RL7 AC008507.4-201ENST00000585464 127 ntBASIC-3.83□□□□□ -3.02
VPS13AQ96RL7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-3.83□□□□□ -3.02
VPS13AQ96RL7 SNORD70.1-201ENST00000391007 85 ntBASIC-3.84□□□□□ -3.02
VPS13AQ96RL7 AC006566.1-201ENST00000608943 513 ntBASIC-3.84□□□□□ -3.02
VPS13AQ96RL7 AC007494.3-201ENST00000624660 743 ntBASIC-3.84□□□□□ -3.02
VPS13AQ96RL7 SNORA53-201ENST00000391141 249 ntBASIC-3.85□□□□□ -3.03
VPS13AQ96RL7 RNU6-935P-201ENST00000410371 100 ntBASIC-3.85□□□□□ -3.03
VPS13AQ96RL7 RNU6-340P-201ENST00000364005 107 ntBASIC-3.85□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.85□□□□□ -3.03
VPS13AQ96RL7 RNU6-278P-201ENST00000390945 109 ntBASIC-3.85□□□□□ -3.03
VPS13AQ96RL7 RNU6-643P-201ENST00000384018 107 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 SNORA20-201ENST00000384662 132 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 U3.27-201ENST00000391237 200 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 RNU7-45P-201ENST00000459460 63 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.184-201ENST00000363884 108 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 RNA5SP54-201ENST00000516951 92 ntBASIC-3.86□□□□□ -3.03
VPS13AQ96RL7 MIR202-201ENST00000362219 110 ntBASIC-3.87□□□□□ -3.03
VPS13AQ96RL7 RNU6-310P-201ENST00000384655 107 ntBASIC-3.87□□□□□ -3.03
VPS13AQ96RL7 AL022161.1-201ENST00000604390 213 ntBASIC-3.87□□□□□ -3.03
VPS13AQ96RL7 RNU6-777P-201ENST00000364265 104 ntBASIC-3.87□□□□□ -3.03
VPS13AQ96RL7 RNU6-243P-201ENST00000391140 107 ntBASIC-3.87□□□□□ -3.03
VPS13AQ96RL7 TRDV1-202ENST00000621643 102 ntBASIC-3.87□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.62-201ENST00000362840 99 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU2-66P-201ENST00000410650 161 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 SNORA25.14-201ENST00000516481 132 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU6-1337P-201ENST00000516525 95 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU7-70P-201ENST00000516941 66 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 AL157392.4-201ENST00000609756 345 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 AC011476.5-201ENST00000615594 130 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 MIR516A2-201ENST00000384888 90 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 MIR516A1-201ENST00000385033 90 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 5S_rRNA.13-201ENST00000622298 123 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU6-235P-201ENST00000362644 107 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU6-97P-201ENST00000363387 104 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNY1P12-201ENST00000364251 105 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU6-938P-201ENST00000411285 103 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 RNU6-893P-201ENST00000458841 100 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 MIR4696-201ENST00000581431 70 ntBASIC-3.88□□□□□ -3.03
VPS13AQ96RL7 SNORA33.1-201ENST00000364957 130 ntBASIC-3.89□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.89□□□□□ -3.03
VPS13AQ96RL7 AC072046.2-201ENST00000618366 268 ntBASIC-3.89□□□□□ -3.03
VPS13AQ96RL7 MIR5692C2-201ENST00000577959 77 ntBASIC-3.89□□□□□ -3.03
VPS13AQ96RL7 MIR6739-201ENST00000622461 75 ntBASIC-3.89□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 RNU6-62P-201ENST00000516526 102 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 AC133794.1-201ENST00000602731 914 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 snoU13.17-201ENST00000458802 104 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 SNORD36C-201ENST00000516733 66 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 RNU6-677P-201ENST00000516914 101 ntBASIC-3.9□□□□□ -3.03
VPS13AQ96RL7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-3.9□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms