Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC105081.1-201ENST00000617727 106 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 AC091304.10-201ENST00000641554 121 ntBASIC1.85□□□□□ -2.11
PTCHD1Q96NR3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 Y_RNA.95-201ENST00000363079 95 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 RNU6-865P-201ENST00000364772 107 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 RNU6-644P-201ENST00000391155 98 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 RNU6-237P-201ENST00000515985 71 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 RNU6-844P-201ENST00000517175 102 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 AL662814.1-201ENST00000617364 121 ntBASIC1.84□□□□□ -2.11
PTCHD1Q96NR3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.558-201ENST00000384685 113 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 MIR588-201ENST00000384900 83 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-447P-201ENST00000410293 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-355P-201ENST00000410427 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-791P-201ENST00000410467 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-705P-201ENST00000410601 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-860P-201ENST00000410860 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 RNU6-785P-201ENST00000411324 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 snoU13.2-201ENST00000459201 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 AL133373.1-201ENST00000497098 94 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 MIR4777-201ENST00000583710 86 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 U6.90-201ENST00000614007 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 U6.70-201ENST00000620287 104 ntBASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PTCHD1Q96NR3 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 SNORD73B-201ENST00000364394 72 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 MIR34C-201ENST00000384831 77 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 MIR2115-201ENST00000516657 100 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 MIR4264-201ENST00000583520 66 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 AP000753.3-201ENST00000604083 169 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 MIR376B-201ENST00000614515 100 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
PTCHD1Q96NR3 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 SNORD38.1-201ENST00000363863 68 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 MIR1302-4-201ENST00000408701 150 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 RPS29P28-201ENST00000446439 141 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 AP003716.2-201ENST00000528260 108 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.290-201ENST00000364879 114 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 MRPL35P3-201ENST00000421557 364 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 RNU7-48P-201ENST00000458875 63 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 MIR4439-201ENST00000583746 80 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 U7.3-201ENST00000616123 62 ntBASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
PTCHD1Q96NR3 MIR103A2-201ENST00000362154 78 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 RNU6-949P-201ENST00000384040 107 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 MT-TN-201ENST00000387400 73 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 RNU6-205P-201ENST00000390858 107 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 MIR1185-1-201ENST00000408598 86 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 AC109327.2-201ENST00000448339 378 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 RNU6-162P-201ENST00000516228 103 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 MIR6740-201ENST00000618268 113 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 MIR6516-201ENST00000630554 81 ntBASIC1.79□□□□□ -2.12
PTCHD1Q96NR3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 RNA5SP264-201ENST00000363115 107 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 MIR563-201ENST00000385080 79 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 AC133485.1-201ENST00000567176 124 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.12
PTCHD1Q96NR3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms