Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.470-201ENST00000384307 117 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 SNORA18-201ENST00000384416 132 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 RNU6-493P-201ENST00000391321 108 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 MTND1P19-201ENST00000511780 315 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.679-201ENST00000516416 91 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 RNU6-1149P-201ENST00000516810 97 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 MIR4752-201ENST00000579672 72 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 MIR4308-201ENST00000580634 81 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 RNU1-29P-201ENST00000606574 126 ntBASIC0.09□□□□□ -2.4
ZNF560Q96MR9 SNORA63.5-201ENST00000363548 123 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU6-103P-201ENST00000363686 107 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU6-716P-201ENST00000365621 103 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU6-949P-201ENST00000384040 107 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 SNORA72.6-201ENST00000384520 129 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU6-713P-201ENST00000384761 107 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.574-201ENST00000384766 95 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
ZNF560Q96MR9 MIR1197-201ENST00000408818 88 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU7-70P-201ENST00000516941 66 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.757-201ENST00000578934 114 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 RNU2-4P-201ENST00000606190 192 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.54-201ENST00000362766 105 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 RNU6-923P-201ENST00000364753 107 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.308-201ENST00000365043 101 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.326-201ENST00000365176 113 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 SNORA2A-201ENST00000383885 135 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.539-201ENST00000384635 107 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 PCNPP3-201ENST00000393579 471 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 RNU6-893P-201ENST00000458841 100 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 MIR1270-201ENST00000459320 83 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.680-201ENST00000516441 93 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.720-201ENST00000517166 92 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 AC044792.1-201ENST00000593294 196 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 U6.104-201ENST00000637979 90 ntBASIC0.07□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.292-201ENST00000364904 97 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.366-201ENST00000365540 102 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 RNU6-578P-201ENST00000390980 103 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 RNU5E-9P-201ENST00000411164 104 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 MTND2P23-201ENST00000422990 651 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 AL121914.1-201ENST00000450188 156 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 RNA5SP47-201ENST00000517230 109 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 MRPS18CP4-201ENST00000535821 231 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 AL359881.1-201ENST00000602916 267 ntBASIC0.06□□□□□ -2.4
ZNF560Q96MR9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
ZNF560Q96MR9 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNY1P11-201ENST00000363759 113 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.262-201ENST00000364641 102 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNY4P28-201ENST00000365281 93 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 SNORA32-201ENST00000384072 121 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 MIR568-201ENST00000385036 95 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 MIR1302-6-201ENST00000408466 90 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 MIR548H2-201ENST00000408874 88 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 SNORD116-25-201ENST00000516517 92 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 RNU6-531P-201ENST00000516694 104 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 MIR4744-201ENST00000581563 82 ntBASIC0.05□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.52-201ENST00000362760 96 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNU6-508P-201ENST00000363231 103 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 SNORD27-201ENST00000363981 72 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.352-201ENST00000365439 102 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.412-201ENST00000384001 104 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.477-201ENST00000384352 108 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNU6-1160P-201ENST00000384546 104 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.562-201ENST00000384695 113 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 SNORD28-201ENST00000384706 75 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNU6-535P-201ENST00000384722 107 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 MIR624-201ENST00000385217 97 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNU6-127P-201ENST00000390897 107 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNA5SP144-201ENST00000410846 116 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 SNORD127-201ENST00000458892 86 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 RNA5SP236-201ENST00000516169 116 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 AL117187.1-201ENST00000555482 181 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 MIR378D2-201ENST00000580636 98 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 AC006504.6-201ENST00000590142 199 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.47-201ENST00000362697 108 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 RNU6-643P-201ENST00000384018 107 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 Y_RNA.515-201ENST00000384535 112 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 MIR606-201ENST00000384851 96 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 RNA5SP127-201ENST00000411051 133 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 RNA5SP227-201ENST00000516184 113 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms