Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 Y_RNA.350-201ENST00000365409 98 ntBASIC0.3□□□□□ -2.36
VPS39Q96JC1 SNORA20-201ENST00000384662 132 ntBASIC0.3□□□□□ -2.36
VPS39Q96JC1 SNORD58.1-201ENST00000391313 66 ntBASIC0.3□□□□□ -2.36
VPS39Q96JC1 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
VPS39Q96JC1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS39Q96JC1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.3□□□□□ -2.36
VPS39Q96JC1 Y_RNA.162-201ENST00000363683 102 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 RNY1P13-201ENST00000365030 105 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 RNU6-47P-201ENST00000383866 107 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 RNU4-70P-201ENST00000384579 139 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 MIR624-201ENST00000385217 97 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 RPL39P25-201ENST00000449384 154 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 SNORA25.16-201ENST00000516741 121 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 MIR4503-201ENST00000582187 83 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 RN7SL793P-201ENST00000583259 296 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 AC062037.2-201ENST00000610137 73 ntBASIC0.29□□□□□ -2.36
VPS39Q96JC1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 RNU6-275P-201ENST00000364910 107 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 SNORA72.6-201ENST00000384520 129 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 RNU6-918P-201ENST00000391219 106 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 MTND5P34-201ENST00000568888 325 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 MIR6082-201ENST00000613604 109 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 MIR7111-201ENST00000619751 72 ntBASIC0.28□□□□□ -2.36
VPS39Q96JC1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 SNORA40.8-201ENST00000411034 126 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 SNORA31.14-201ENST00000516728 116 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 AC022559.1-201ENST00000520905 205 ntBASIC0.27□□□□□ -2.37
VPS39Q96JC1 Y_RNA.52-201ENST00000362760 96 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 SNORD118-201ENST00000363593 134 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 Y_RNA.307-201ENST00000365022 117 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 RNU6-949P-201ENST00000384040 107 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 Y_RNA.521-201ENST00000384560 114 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 RNU6-768P-201ENST00000384683 107 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.26□□□□□ -2.37
VPS39Q96JC1 uc_338.16-201ENST00000621804 95 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
VPS39Q96JC1 RNU6-349P-201ENST00000362402 107 ntBASIC0.25□□□□□ -2.37
VPS39Q96JC1 RNY1P11-201ENST00000363759 113 ntBASIC0.25□□□□□ -2.37
VPS39Q96JC1 SNORA25.7-201ENST00000364375 127 ntBASIC0.25□□□□□ -2.37
VPS39Q96JC1 Y_RNA.556-201ENST00000384677 113 ntBASIC0.25□□□□□ -2.37
VPS39Q96JC1 RNU7-79P-201ENST00000516082 62 ntBASIC0.25□□□□□ -2.37
VPS39Q96JC1 RNU6-1045P-201ENST00000516321 107 ntBASIC0.25□□□□□ -2.37
VPS39Q96JC1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
VPS39Q96JC1 RNU6-508P-201ENST00000363231 103 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 Y_RNA.193-201ENST00000363979 102 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 SNORA32-201ENST00000384072 121 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 RNY1P6-201ENST00000384193 109 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 RNU6-291P-201ENST00000384720 107 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 MIR1302-3-201ENST00000408128 138 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 RNA5SP144-201ENST00000410846 116 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 AL512326.2-201ENST00000426359 151 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 RNU6-1023P-201ENST00000516137 106 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 AC022523.2-201ENST00000561045 150 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 U4.1-201ENST00000620349 87 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 AC099654.10-201ENST00000640395 161 ntBASIC0.24□□□□□ -2.37
VPS39Q96JC1 Y_RNA.75-201ENST00000362927 97 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 SNORA20.1-201ENST00000364790 130 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 RNY1P4-201ENST00000384595 115 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 MTND3P2-201ENST00000438452 342 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 SUMO1P3-201ENST00000439961 304 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 RNU6-1219P-201ENST00000516143 112 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 RNA5SP236-201ENST00000516169 116 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 AC078938.1-201ENST00000620993 318 ntBASIC0.23□□□□□ -2.37
VPS39Q96JC1 MIR411-201ENST00000362239 96 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 RNU6-815P-201ENST00000384080 113 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 SNORD71-201ENST00000411292 86 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 AC069271.1-201ENST00000445577 156 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 RNU4-71P-201ENST00000516258 113 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 RNU6-531P-201ENST00000516694 104 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
VPS39Q96JC1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 RNU6-535P-201ENST00000384722 107 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 RNU7-113P-201ENST00000459273 62 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 RNU2-35P-201ENST00000516446 142 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 RNA5SP33-201ENST00000516687 98 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 RNU2-60P-201ENST00000517290 128 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.21□□□□□ -2.38
VPS39Q96JC1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 SNORA63.5-201ENST00000363548 123 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 RNU6-702P-201ENST00000364982 107 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.2□□□□□ -2.38
VPS39Q96JC1 RNU6-196P-201ENST00000384315 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms