Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MIR4771-1-201ENST00000582617 74 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
CDK5RAP3Q96JB5 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-1104P-201ENST00000384723 104 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 RNA5SP136-201ENST00000410906 107 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-1086P-201ENST00000410930 100 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 FABP5P4-201ENST00000437203 171 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 SNORA4-201ENST00000584302 138 ntBASIC1.18□□□□□ -2.22
CDK5RAP3Q96JB5 Y_RNA.299-201ENST00000364973 94 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 SNORD58C-201ENST00000365223 64 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-80P-201ENST00000384195 107 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 MIR100-201ENST00000385259 80 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 MT-TF-201ENST00000387314 71 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RNU4-69P-201ENST00000410677 143 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RPS26P5-201ENST00000418544 335 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 AL603825.1-201ENST00000438481 80 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RNU7-107P-201ENST00000459121 61 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-772P-201ENST00000516042 105 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 RNU7-79P-201ENST00000516082 62 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.17□□□□□ -2.22
CDK5RAP3Q96JB5 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 Y_RNA.218-201ENST00000364218 104 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 RNU6-53P-201ENST00000365367 106 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 Y_RNA.528-201ENST00000384575 108 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 RNU7-35P-201ENST00000517174 62 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 MIR3910-1-201ENST00000580936 111 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
CDK5RAP3Q96JB5 RNA5SP432-201ENST00000362480 116 ntBASIC1.15□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.71-201ENST00000362892 104 ntBASIC1.15□□□□□ -2.23
CDK5RAP3Q96JB5 RNY1P13-201ENST00000365030 105 ntBASIC1.15□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.525-201ENST00000384570 113 ntBASIC1.15□□□□□ -2.23
CDK5RAP3Q96JB5 AC025166.1-201ENST00000612411 163 ntBASIC1.15□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.213-201ENST00000364178 111 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-81P-201ENST00000365608 104 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-959P-201ENST00000384671 107 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 MIR759-201ENST00000390224 91 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 MIR1827-201ENST00000408549 66 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 RNU7-185P-201ENST00000459215 60 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 COX6CP6-201ENST00000490840 228 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 PDCD5P2-201ENST00000507570 312 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 AC020891.4-201ENST00000605745 93 ntBASIC1.14□□□□□ -2.23
CDK5RAP3Q96JB5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.198-201ENST00000364013 98 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-949P-201ENST00000384040 107 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD77B-201ENST00000391112 67 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD93-201ENST00000408813 74 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.630-201ENST00000411370 108 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-977P-201ENST00000516411 103 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 AL136317.1-201ENST00000612653 226 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 AC132825.6-201ENST00000638861 357 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 AL589743.1-201ENST00000551932 2712 ntBASIC1.13□□□□□ -2.23
CDK5RAP3Q96JB5 AL157777.2-201ENST00000258070 137 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-369P-201ENST00000362515 102 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 MIRLET7F2-201ENST00000385277 83 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 MT-TI-201ENST00000387365 69 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-321P-201ENST00000410912 106 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 RNU4-61P-201ENST00000411243 107 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 U7.7-201ENST00000459276 60 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 MIR1270-201ENST00000459320 83 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 RNU7-6P-201ENST00000516845 62 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 MIR4676-201ENST00000583078 72 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 MTND5P18-201ENST00000445624 1801 ntBASIC1.12□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD116-14-201ENST00000383894 92 ntBASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD116-17-201ENST00000383929 92 ntBASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD116-15-201ENST00000384445 92 ntBASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD116-19-201ENST00000384729 92 ntBASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-1110P-201ENST00000516462 101 ntBASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 MIR3163-201ENST00000581592 73 ntBASIC1.11□□□□□ -2.23
CDK5RAP3Q96JB5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 RNU1-36P-201ENST00000365130 165 ntBASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.346-201ENST00000365385 112 ntBASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-1333P-201ENST00000516162 93 ntBASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 RNU6-659P-201ENST00000516454 104 ntBASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 SNORD67.1-201ENST00000516618 108 ntBASIC1.1□□□□□ -2.23
CDK5RAP3Q96JB5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.127-201ENST00000363386 109 ntBASIC1.09□□□□□ -2.23
CDK5RAP3Q96JB5 MIR520F-201ENST00000384824 87 ntBASIC1.09□□□□□ -2.23
CDK5RAP3Q96JB5 MIR125B2-201ENST00000385128 89 ntBASIC1.09□□□□□ -2.23
CDK5RAP3Q96JB5 Y_RNA.712-201ENST00000517011 92 ntBASIC1.09□□□□□ -2.23
CDK5RAP3Q96JB5 MIR4804-201ENST00000581683 73 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 249.2 ms