Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 SNORD113.3-201ENST00000364630 78 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 RNU6-1056P-201ENST00000383996 107 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 SNORA2B-201ENST00000384583 137 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 SNORA75.2-201ENST00000391138 150 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 SNORA75.3-201ENST00000391231 150 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 SNORD111-201ENST00000408139 94 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 RNU6-1086P-201ENST00000410930 100 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 MIR548AE2-201ENST00000583456 67 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
CTHRC1Q96CG8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 SNORA32-201ENST00000384072 121 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 RNU6-342P-201ENST00000384521 104 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 MTND5P34-201ENST00000568888 325 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 MIR8070-201ENST00000616510 88 ntBASIC1.23□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.273-201ENST00000364703 102 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.353-201ENST00000365440 108 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 MIR548A1-201ENST00000385041 97 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 RNA5SP95-201ENST00000410319 137 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 RNU6-1064P-201ENST00000410626 104 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.629-201ENST00000411368 105 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 SNORD33.1-201ENST00000516213 88 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 AL662814.1-201ENST00000617364 121 ntBASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
CTHRC1Q96CG8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 RPL39P25-201ENST00000449384 154 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 RNU7-79P-201ENST00000516082 62 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 RNU7-35P-201ENST00000517174 62 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 AC036111.3-201ENST00000526389 112 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 MIR6740-201ENST00000618268 113 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 AC012676.2-201ENST00000619258 186 ntBASIC1.21□□□□□ -2.22
CTHRC1Q96CG8 RNU6-1290P-201ENST00000362957 109 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 RNU6-476P-201ENST00000384726 107 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 MT-TI-201ENST00000387365 69 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 MIR18B-201ENST00000454574 71 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 AC007012.1-201ENST00000567192 175 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 AC141846.1-201ENST00000568348 142 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 AC106800.4-201ENST00000614905 153 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CTHRC1Q96CG8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 RNU6-1144P-201ENST00000384247 104 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 Y_RNA.466-201ENST00000384294 113 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 SNORD116-21-201ENST00000384507 92 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 MIR548D2-201ENST00000384955 97 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 MIR563-201ENST00000385080 79 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 MT-TF-201ENST00000387314 71 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 FAM71BP1-201ENST00000604431 523 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.19□□□□□ -2.22
CTHRC1Q96CG8 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 MIR4679-2-201ENST00000578358 77 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 SNORA4-201ENST00000584302 138 ntBASIC1.18□□□□□ -2.22
CTHRC1Q96CG8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 RNU6-934P-201ENST00000365154 107 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 RNU6-880P-201ENST00000384526 107 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 RNU6-994P-201ENST00000410507 111 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 RNU6-735P-201ENST00000410612 107 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 snoU13.18-201ENST00000459483 104 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 RNU6-412P-201ENST00000516434 106 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 AL157834.3-201ENST00000615543 103 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 AC087741.2-201ENST00000619415 172 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
CTHRC1Q96CG8 SNORD115-19-201ENST00000363098 82 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 SNORD115-18-201ENST00000363293 82 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 SNORD115-17-201ENST00000364612 82 ntBASIC1.16□□□□□ -2.22
CTHRC1Q96CG8 RNY1P13-201ENST00000365030 105 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 252 ms