Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 MIR563-201ENST00000385080 79 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 AC025627.3-201ENST00000582078 182 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 uc_338.6-201ENST00000613544 171 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 AL662814.1-201ENST00000617364 121 ntBASIC1.17□□□□□ -2.22
CHMP4CQ96CF2 SNORA18-201ENST00000384416 132 ntBASIC1.16□□□□□ -2.22
CHMP4CQ96CF2 RNU7-164P-201ENST00000459221 62 ntBASIC1.16□□□□□ -2.22
CHMP4CQ96CF2 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
CHMP4CQ96CF2 SNORA4-201ENST00000584302 138 ntBASIC1.16□□□□□ -2.22
CHMP4CQ96CF2 AP001340.1-201ENST00000624405 217 ntBASIC1.16□□□□□ -2.22
CHMP4CQ96CF2 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.22
CHMP4CQ96CF2 MIR1257-201ENST00000408490 117 ntBASIC1.15□□□□□ -2.23
CHMP4CQ96CF2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
CHMP4CQ96CF2 RNU6-426P-201ENST00000516464 97 ntBASIC1.15□□□□□ -2.23
CHMP4CQ96CF2 MIR30D-201ENST00000362283 70 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 Y_RNA.366-201ENST00000365540 102 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 RNY1P5-201ENST00000383890 115 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 AC015818.7-201ENST00000428754 109 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 AC087499.7-201ENST00000441958 109 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 RNA5SP220-201ENST00000516298 104 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 RNA5SP33-201ENST00000516687 98 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 AL078603.1-201ENST00000603824 313 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 U7.2-201ENST00000607576 63 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 MIR6734-201ENST00000621166 68 ntBASIC1.14□□□□□ -2.23
CHMP4CQ96CF2 RNU6-42P-201ENST00000384165 107 ntBASIC1.13□□□□□ -2.23
CHMP4CQ96CF2 AC004812.1-201ENST00000540773 146 ntBASIC1.13□□□□□ -2.23
CHMP4CQ96CF2 AL137067.1-201ENST00000615933 120 ntBASIC1.13□□□□□ -2.23
CHMP4CQ96CF2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.13□□□□□ -2.23
CHMP4CQ96CF2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 AL512326.2-201ENST00000426359 151 ntBASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 RNU7-185P-201ENST00000459215 60 ntBASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 RNU2-35P-201ENST00000516446 142 ntBASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 AC141846.1-201ENST00000568348 142 ntBASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 MIR3121-201ENST00000579680 77 ntBASIC1.12□□□□□ -2.23
CHMP4CQ96CF2 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 RNU6-342P-201ENST00000384521 104 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 MIR520F-201ENST00000384824 87 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 SNORD105-201ENST00000386910 85 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 RNU7-123P-201ENST00000515911 60 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 RNA5SP272-201ENST00000516095 111 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 MIR4676-201ENST00000583078 72 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 MIR6857-201ENST00000613267 93 ntBASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
CHMP4CQ96CF2 SNORD115-2-201ENST00000362842 82 ntBASIC1.1□□□□□ -2.23
CHMP4CQ96CF2 Y_RNA.298-201ENST00000364960 107 ntBASIC1.1□□□□□ -2.23
CHMP4CQ96CF2 SNORD115-20-201ENST00000365099 82 ntBASIC1.1□□□□□ -2.23
CHMP4CQ96CF2 Y_RNA.506-201ENST00000384494 102 ntBASIC1.1□□□□□ -2.23
CHMP4CQ96CF2 RNU6-346P-201ENST00000516288 111 ntBASIC1.1□□□□□ -2.23
CHMP4CQ96CF2 AC108081.1-201ENST00000604358 221 ntBASIC1.1□□□□□ -2.23
CHMP4CQ96CF2 Y_RNA.114-201ENST00000363265 113 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 RNU6-647P-201ENST00000364243 107 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 RNU6-1062P-201ENST00000383908 107 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 SNORA32-201ENST00000384072 121 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 RNU6-364P-201ENST00000384387 107 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 MIR938-201ENST00000401216 83 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 SNORD93-201ENST00000408813 74 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 AC020891.4-201ENST00000605745 93 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 TUG1_4.1-201ENST00000619464 181 ntBASIC1.09□□□□□ -2.23
CHMP4CQ96CF2 HSBP1P2-201ENST00000299671 229 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 MIR489-201ENST00000384923 84 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 MIR125B2-201ENST00000385128 89 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
CHMP4CQ96CF2 RNU1-36P-201ENST00000365130 165 ntBASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 Y_RNA.568-201ENST00000384742 113 ntBASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 MIR520H-201ENST00000385126 88 ntBASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 SNORA40-201ENST00000388090 126 ntBASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 RNY4P20-201ENST00000516678 93 ntBASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 MIR548AE2-201ENST00000583456 67 ntBASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CHMP4CQ96CF2 Y_RNA.294-201ENST00000364916 102 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 RNU6-949P-201ENST00000384040 107 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 RNU1-119P-201ENST00000391122 165 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 SNORD99-201ENST00000408612 74 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 RNU7-79P-201ENST00000516082 62 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 ACA64.5-201ENST00000516207 127 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 Y_RNA.703-201ENST00000516846 111 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 RNU7-35P-201ENST00000517174 62 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 MIR4653-201ENST00000585107 83 ntBASIC1.06□□□□□ -2.24
CHMP4CQ96CF2 RNY1P13-201ENST00000365030 105 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-447P-201ENST00000410293 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-1118P-201ENST00000410382 104 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms