Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU6-240P-201ENST00000516098 97 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 SNORA25.12-201ENST00000516202 82 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 RNU6-255P-201ENST00000516957 105 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 MIR4305-201ENST00000583252 102 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 MIR6515-201ENST00000619843 57 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 AC010332.2-201ENST00000613083 1904 ntBASIC0.85□□□□□ -2.27
SLC44A1Q8WWI5 Y_RNA.488-201ENST00000384403 102 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 MT-TR-201ENST00000387439 65 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 SNORD83.1-201ENST00000411362 77 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 AP001328.1-201ENST00000528550 176 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 AC133485.4-201ENST00000561835 220 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 AC138907.4-201ENST00000570107 226 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 MIR3121-201ENST00000579680 77 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
SLC44A1Q8WWI5 RNU6-508P-201ENST00000363231 103 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.420-201ENST00000384043 110 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.506-201ENST00000384494 102 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 RNA5SP237-201ENST00000410414 113 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.692-201ENST00000516627 105 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 AC022709.1-201ENST00000615967 87 ntBASIC0.83□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.171-201ENST00000363760 102 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 RNU7-113P-201ENST00000459273 62 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 RNU2-35P-201ENST00000516446 142 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 MIR4771-2-201ENST00000577758 74 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 MIR4771-1-201ENST00000582617 74 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 AC021443.1-201ENST00000604478 211 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 U7.2-201ENST00000607576 63 ntBASIC0.82□□□□□ -2.28
SLC44A1Q8WWI5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.280-201ENST00000364765 112 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 SNORA18-201ENST00000384416 132 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.531-201ENST00000384589 121 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 AC141846.1-201ENST00000568348 142 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.298-201ENST00000364960 107 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.366-201ENST00000365540 102 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.470-201ENST00000384307 117 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 MIR1257-201ENST00000408490 117 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 RNU7-185P-201ENST00000459215 60 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 RNU7-164P-201ENST00000459221 62 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 RNU7-35P-201ENST00000517174 62 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 AC004812.1-201ENST00000540773 146 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 MIR4804-201ENST00000581683 73 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 MIR4676-201ENST00000583078 72 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 AL353765.1-201ENST00000605514 183 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 AC020891.4-201ENST00000605745 93 ntBASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SLC44A1Q8WWI5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.343-201ENST00000365354 112 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-1062P-201ENST00000383908 107 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-949P-201ENST00000384040 107 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-342P-201ENST00000384521 104 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 SNORD105-201ENST00000386910 85 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 AL512326.2-201ENST00000426359 151 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 RNU7-123P-201ENST00000515911 60 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-426P-201ENST00000516464 97 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 AC108081.1-201ENST00000604358 221 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 AL137067.1-201ENST00000615933 120 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 AC023934.1-201ENST00000574529 2389 ntBASIC0.79□□□□□ -2.28
SLC44A1Q8WWI5 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-647P-201ENST00000364243 107 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.568-201ENST00000384742 113 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 MIR598-201ENST00000384868 97 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 MIR125B2-201ENST00000385128 89 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 MIR938-201ENST00000401216 83 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 RNU6-977P-201ENST00000516411 103 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 RNA5SP33-201ENST00000516687 98 ntBASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.78□□□□□ -2.28
SLC44A1Q8WWI5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.77□□□□□ -2.29
SLC44A1Q8WWI5 RNY1P13-201ENST00000365030 105 ntBASIC0.77□□□□□ -2.29
SLC44A1Q8WWI5 MIR7-2-201ENST00000384970 110 ntBASIC0.77□□□□□ -2.29
SLC44A1Q8WWI5 RNU7-56P-201ENST00000458744 62 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms