Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU6-616P-201ENST00000384353 107 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 Y_RNA.601-201ENST00000410500 113 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 HMGN1P33-201ENST00000432945 451 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 AL353813.1-201ENST00000440700 253 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-844P-201ENST00000517175 102 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 FAM71BP1-201ENST00000604431 523 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 AL442128.1-201ENST00000615151 90 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 MALAT1.1-201ENST00000618249 95 ntBASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SIMC1Q8NDZ2 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-832P-201ENST00000363319 107 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-679P-201ENST00000391003 106 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 SNORA7.5-201ENST00000410672 110 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 MIR8055-201ENST00000610739 97 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 MIR8070-201ENST00000616510 88 ntBASIC1.7□□□□□ -2.14
SIMC1Q8NDZ2 Y_RNA.388-201ENST00000383919 113 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 SNORA32-201ENST00000384072 121 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 SNORD77B-201ENST00000391112 67 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 RNY4P29-201ENST00000410801 97 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 snoU13.16-201ENST00000459350 104 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 TRMT112P2-201ENST00000512910 132 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 AL359821.1-201ENST00000605519 182 ntBASIC1.69□□□□□ -2.14
SIMC1Q8NDZ2 MIR302D-201ENST00000362275 68 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 Y_RNA.10-201ENST00000362371 110 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 SNORA26.2-201ENST00000390922 122 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 AC027119.1-201ENST00000440877 241 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-795P-201ENST00000516323 103 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 RNU7-43P-201ENST00000516554 64 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-521P-201ENST00000516663 105 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 MIR4764-201ENST00000580680 88 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 AC012531.4-201ENST00000616509 177 ntBASIC1.68□□□□□ -2.14
SIMC1Q8NDZ2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-170P-201ENST00000362832 104 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 SNORA1.1-201ENST00000364671 133 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 snoU13.18-201ENST00000459483 104 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 MIR548Z-201ENST00000584743 97 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.67□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-342P-201ENST00000384521 104 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 BTF3P4-201ENST00000418852 495 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 RPL30P7-201ENST00000479312 323 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 RNU7-61P-201ENST00000515897 61 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 RNU6-1018P-201ENST00000516577 106 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 AC062037.1-201ENST00000605302 128 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 AC008133.2-201ENST00000624540 351 ntBASIC1.66□□□□□ -2.14
SIMC1Q8NDZ2 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.377-201ENST00000365644 108 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-1201P-201ENST00000384227 107 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-644P-201ENST00000391155 98 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 AC096949.1-201ENST00000412047 152 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 AC004941.2-201ENST00000427009 228 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 AC245047.7-201ENST00000440265 293 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 AC019176.1-201ENST00000518519 225 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 AC026421.1-201ENST00000519101 163 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 MIR8065-201ENST00000620577 100 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 Z97988.1-201ENST00000637697 135 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 AC091304.10-201ENST00000641554 121 ntBASIC1.65□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.290-201ENST00000364879 114 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 SNORA18-201ENST00000384416 132 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 SNORA67.5-201ENST00000391036 107 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 SNORA17.3-201ENST00000391159 129 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 MIR4777-201ENST00000583710 86 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-1313P-201ENST00000362622 102 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 SNORD115-35-201ENST00000365122 82 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-602P-201ENST00000411155 105 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 RNU7-35P-201ENST00000517174 62 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 MIR548AO-201ENST00000579992 96 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 AL512310.12-203ENST00000640543 90 ntBASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
SIMC1Q8NDZ2 SNORD45B-201ENST00000364617 72 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-60P-201ENST00000364792 103 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 RNA5SP363-201ENST00000365072 115 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 AC090844.1-201ENST00000422019 156 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 RNU7-41P-201ENST00000515917 61 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 RNU7-2P-201ENST00000516096 62 ntBASIC1.62□□□□□ -2.15
SIMC1Q8NDZ2 RNU6-162P-201ENST00000516228 103 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms