Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 uc_338.6-201ENST00000613544 171 ntBASIC1.18□□□□□ -2.22
PRPF38AQ8NAV1 SNORD115-2-201ENST00000362842 82 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 SNORD115-20-201ENST00000365099 82 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 SNORA22-201ENST00000383907 134 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 SNORA22C-201ENST00000384614 134 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-1237P-201ENST00000384777 107 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 MIR569-201ENST00000385228 96 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 MIR1257-201ENST00000408490 117 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 RNU5E-3P-201ENST00000515913 68 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 RNU6-977P-201ENST00000516411 103 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PRPF38AQ8NAV1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 MIR30D-201ENST00000362283 70 ntBASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 Y_RNA.420-201ENST00000384043 110 ntBASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 RNU7-164P-201ENST00000459221 62 ntBASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 RMST_2.1-201ENST00000617263 136 ntBASIC1.16□□□□□ -2.22
PRPF38AQ8NAV1 SNORA18-201ENST00000384416 132 ntBASIC1.15□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.15□□□□□ -2.23
PRPF38AQ8NAV1 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
PRPF38AQ8NAV1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
PRPF38AQ8NAV1 U7.2-201ENST00000607576 63 ntBASIC1.15□□□□□ -2.23
PRPF38AQ8NAV1 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.23
PRPF38AQ8NAV1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 MIR373-201ENST00000362273 69 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 Y_RNA.171-201ENST00000363760 102 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 Y_RNA.299-201ENST00000364973 94 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 RNA5SP33-201ENST00000516687 98 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 AC141846.1-201ENST00000568348 142 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 MIR3121-201ENST00000579680 77 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 AL137067.1-201ENST00000615933 120 ntBASIC1.14□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-647P-201ENST00000364243 107 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 AC015818.7-201ENST00000428754 109 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 AC087499.7-201ENST00000441958 109 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 RNU7-185P-201ENST00000459215 60 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-255P-201ENST00000516957 105 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 AC004812.1-201ENST00000540773 146 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 MIR6788-201ENST00000618842 66 ntBASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
PRPF38AQ8NAV1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 MIR938-201ENST00000401216 83 ntBASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 MIR548J-201ENST00000408833 112 ntBASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 RPL39P28-201ENST00000465655 155 ntBASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 TUG1_4.1-201ENST00000619464 181 ntBASIC1.12□□□□□ -2.23
PRPF38AQ8NAV1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 Y_RNA.366-201ENST00000365540 102 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 MIR608-201ENST00000384820 100 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 MIR520F-201ENST00000384824 87 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 MIR605-201ENST00000385078 83 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 MIR125B2-201ENST00000385128 89 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 RNU2-35P-201ENST00000516446 142 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 AL353765.1-201ENST00000605514 183 ntBASIC1.11□□□□□ -2.23
PRPF38AQ8NAV1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-949P-201ENST00000384040 107 ntBASIC1.1□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-364P-201ENST00000384387 107 ntBASIC1.1□□□□□ -2.23
PRPF38AQ8NAV1 SNORD93-201ENST00000408813 74 ntBASIC1.1□□□□□ -2.23
PRPF38AQ8NAV1 AL512326.2-201ENST00000426359 151 ntBASIC1.1□□□□□ -2.23
PRPF38AQ8NAV1 MIR4804-201ENST00000581683 73 ntBASIC1.1□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-508P-201ENST00000363231 103 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-342P-201ENST00000384521 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU1-119P-201ENST00000391122 165 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-447P-201ENST00000410293 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1118P-201ENST00000410382 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1076P-201ENST00000410397 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-355P-201ENST00000410427 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-791P-201ENST00000410467 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-705P-201ENST00000410601 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1100P-201ENST00000410691 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-860P-201ENST00000410860 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1217P-201ENST00000411276 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-785P-201ENST00000411324 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU7-123P-201ENST00000515911 60 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-426P-201ENST00000516464 97 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 RNU7-35P-201ENST00000517174 62 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 MIR151B-201ENST00000584249 96 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 AC020891.4-201ENST00000605745 93 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 U6.90-201ENST00000614007 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 U6.70-201ENST00000620287 104 ntBASIC1.09□□□□□ -2.23
PRPF38AQ8NAV1 Y_RNA.114-201ENST00000363265 113 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 RNU6-1062P-201ENST00000383908 107 ntBASIC1.08□□□□□ -2.24
PRPF38AQ8NAV1 Y_RNA.470-201ENST00000384307 117 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms