Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.36-201ENST00000362602 112 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.52-201ENST00000362760 96 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-403P-201ENST00000363163 104 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-312P-201ENST00000364629 107 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.297-201ENST00000364950 91 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 RNY1P6-201ENST00000384193 109 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 SNORA18-201ENST00000384416 132 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.515-201ENST00000384535 112 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-679P-201ENST00000391003 106 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 AC141846.1-201ENST00000568348 142 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 MIR4714-201ENST00000580728 77 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 AC090897.1-201ENST00000580909 226 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 SNORD92-201ENST00000585078 85 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 AC078938.1-201ENST00000620993 318 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 AL589743.1-201ENST00000551932 2712 ntBASIC0.4□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.171-201ENST00000363760 102 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-379P-201ENST00000363813 104 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.357-201ENST00000365487 109 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.401-201ENST00000383965 117 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-893P-201ENST00000458841 100 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.644-201ENST00000459006 113 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.674-201ENST00000516362 113 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-1258P-201ENST00000516911 111 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 MIR6844-201ENST00000637122 62 ntBASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-818P-201ENST00000364837 108 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 RNA5SP117-201ENST00000365294 118 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 MIR216A-201ENST00000385063 110 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 U8.15-201ENST00000390947 134 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 SNORD100-201ENST00000408573 76 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.793-201ENST00000411222 111 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-388P-201ENST00000517012 105 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-389P-201ENST00000517048 105 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.757-201ENST00000578934 114 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 AC141273.2-201ENST00000618989 130 ntBASIC0.38□□□□□ -2.35
CCDC71LQ8N9Z2 RNU4-45P-201ENST00000365469 141 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-588P-201ENST00000410281 105 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 AC002350.1-201ENST00000490759 375 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-448P-201ENST00000517052 107 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 AP002392.1-201ENST00000537692 208 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 AC072026.1-201ENST00000605023 201 ntBASIC0.37□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-349P-201ENST00000362402 107 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-690P-201ENST00000365242 106 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 SNORA72.6-201ENST00000384520 129 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.552-201ENST00000384665 112 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 SNORA75.5-201ENST00000391291 81 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 RNA5SP144-201ENST00000410846 116 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 RNU5E-9P-201ENST00000411164 104 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 AL022718.1-201ENST00000412004 84 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 RNU7-113P-201ENST00000459273 62 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 MIR8066-201ENST00000617280 78 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNY1P13-201ENST00000365030 105 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-949P-201ENST00000384040 107 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.470-201ENST00000384307 117 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 Y_RNA.497-201ENST00000384447 98 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-239P-201ENST00000390990 99 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 SNORD37.2-201ENST00000391075 66 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNU6-1086P-201ENST00000410930 100 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNA5SP236-201ENST00000516169 116 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 RNA5SP33-201ENST00000516687 98 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 MIR3678-201ENST00000578455 94 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 MIR4491-201ENST00000581087 68 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 MIR3658-201ENST00000636291 56 ntBASIC0.35□□□□□ -2.35
CCDC71LQ8N9Z2 SNORA32-201ENST00000384072 121 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 MIR7-2-201ENST00000384970 110 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 MIR936-201ENST00000401264 98 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 RNU7-79P-201ENST00000516082 62 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 RNU6-240P-201ENST00000516098 97 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 RNU6-861P-201ENST00000516745 106 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 MIR6082-201ENST00000613604 109 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
CCDC71LQ8N9Z2 SNORD114-23-201ENST00000363536 72 ntBASIC0.33□□□□□ -2.36
CCDC71LQ8N9Z2 RNU4-84P-201ENST00000364200 139 ntBASIC0.33□□□□□ -2.36
CCDC71LQ8N9Z2 RNU6-200P-201ENST00000364743 107 ntBASIC0.33□□□□□ -2.36
CCDC71LQ8N9Z2 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
CCDC71LQ8N9Z2 snosnR66.1-201ENST00000391095 99 ntBASIC0.33□□□□□ -2.36
CCDC71LQ8N9Z2 AL512326.2-201ENST00000426359 151 ntBASIC0.33□□□□□ -2.36
CCDC71LQ8N9Z2 MTATP6P21-201ENST00000440681 189 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms