Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MIR588-201ENST00000384900 83 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MT-TN-201ENST00000387400 73 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 RNU6-910P-201ENST00000390844 107 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 RNA5SP95-201ENST00000410319 137 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 snoU13.2-201ENST00000459201 104 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 MIR4264-201ENST00000583520 66 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 AC087741.2-201ENST00000619415 172 ntBASIC1.13□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 MIR548D2-201ENST00000384955 97 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 SNORA75.2-201ENST00000391138 150 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 SNORA75.3-201ENST00000391231 150 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNA5SP237-201ENST00000410414 113 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 RNU7-79P-201ENST00000516082 62 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 SEPT14P17-201ENST00000617978 177 ntBASIC1.12□□□□□ -2.23
CLIP4Q8N3C7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORA63.5-201ENST00000363548 123 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU6-215P-201ENST00000365169 102 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU6-880P-201ENST00000384526 107 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORD77B-201ENST00000391112 67 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU6-1086P-201ENST00000410930 100 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR1270-201ENST00000459320 83 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 RNU7-35P-201ENST00000517174 62 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR4679-2-201ENST00000578358 77 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 MIR6740-201ENST00000618268 113 ntBASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.11□□□□□ -2.23
CLIP4Q8N3C7 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 RNU6-589P-201ENST00000516485 107 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLIP4Q8N3C7 AL589743.1-201ENST00000551932 2712 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 RNU6-616P-201ENST00000384353 107 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 SNORA2B-201ENST00000384583 137 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 RNU6-919P-201ENST00000516731 104 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 Y_RNA.709-201ENST00000516952 92 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 AC141846.1-201ENST00000568348 142 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 AL662814.1-201ENST00000617364 121 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 AL035470.1-201ENST00000622571 220 ntBASIC1.09□□□□□ -2.23
CLIP4Q8N3C7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CLIP4Q8N3C7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 MIR377-201ENST00000362145 69 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD115-19-201ENST00000363098 82 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD115-18-201ENST00000363293 82 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD115-17-201ENST00000364612 82 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6-580P-201ENST00000365159 107 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 AL035461.1-201ENST00000421490 332 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RPL39P34-201ENST00000477141 156 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 RNU6-412P-201ENST00000516434 106 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 FAM71BP1-201ENST00000604431 523 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 AL359821.1-201ENST00000605519 182 ntBASIC1.08□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORD113.3-201ENST00000364630 78 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNY1P13-201ENST00000365030 105 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNU6-44P-201ENST00000384045 107 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNY4P18-201ENST00000391107 89 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 SNORD67.1-201ENST00000516618 108 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC023827.1-201ENST00000569247 97 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 MIR1255B1-201ENST00000636325 63 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 AC008163.1-202ENST00000636004 2889 ntBASIC1.07□□□□□ -2.24
CLIP4Q8N3C7 MIR30D-201ENST00000362283 70 ntBASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CLIP4Q8N3C7 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms