Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.38□□□□□ -2.03
SIX5Q8N196 SNORD116-10-201ENST00000363791 102 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 snoU13.9-201ENST00000458927 103 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 RNU6-250P-201ENST00000516958 103 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 RNU6-1006P-201ENST00000516998 103 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 SNORA44.1-201ENST00000517031 108 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 MTND5P40-201ENST00000559945 246 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 PRELID3BP2-201ENST00000605362 201 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 RNU6-90P-201ENST00000606352 106 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 IGLL4P-201ENST00000614590 133 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 AP001362.1-201ENST00000625165 124 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
SIX5Q8N196 MIR588-201ENST00000384900 83 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 U8.15-201ENST00000390947 134 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 MIR548G-201ENST00000408442 89 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 Y_RNA.593-201ENST00000410292 98 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 snoU13.2-201ENST00000459201 104 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 MIR2115-201ENST00000516657 100 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 RNU6-86P-201ENST00000606534 107 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.37□□□□□ -2.03
SIX5Q8N196 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIX5Q8N196 RNY1P1-201ENST00000364372 112 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 RNA5SP173-201ENST00000364857 136 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 RNA5SP138-201ENST00000365098 114 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 AL356379.1-201ENST00000414105 126 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 MIR4264-201ENST00000583520 66 ntBASIC2.36□□□□□ -2.03
SIX5Q8N196 SNORD116-22-201ENST00000384430 92 ntBASIC2.35□□□□□ -2.03
SIX5Q8N196 AC244023.1-201ENST00000426884 112 ntBASIC2.35□□□□□ -2.03
SIX5Q8N196 AP000942.3-201ENST00000603702 160 ntBASIC2.35□□□□□ -2.03
SIX5Q8N196 AC242498.1-201ENST00000604134 111 ntBASIC2.35□□□□□ -2.03
SIX5Q8N196 AC103810.7-201ENST00000607821 91 ntBASIC2.35□□□□□ -2.03
SIX5Q8N196 MIR7111-201ENST00000619751 72 ntBASIC2.35□□□□□ -2.03
SIX5Q8N196 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
SIX5Q8N196 Y_RNA.190-201ENST00000363964 101 ntBASIC2.34□□□□□ -2.03
SIX5Q8N196 RNU6-949P-201ENST00000384040 107 ntBASIC2.34□□□□□ -2.03
SIX5Q8N196 Y_RNA.567-201ENST00000384736 106 ntBASIC2.34□□□□□ -2.03
SIX5Q8N196 MIR30A-201ENST00000385092 71 ntBASIC2.34□□□□□ -2.03
SIX5Q8N196 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.34□□□□□ -2.03
SIX5Q8N196 RNU6-295P-201ENST00000516901 104 ntBASIC2.34□□□□□ -2.03
SIX5Q8N196 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
SIX5Q8N196 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SIX5Q8N196 RNU6-1163P-201ENST00000364516 107 ntBASIC2.33□□□□□ -2.04
SIX5Q8N196 RNU6-1065P-201ENST00000384513 106 ntBASIC2.33□□□□□ -2.04
SIX5Q8N196 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.33□□□□□ -2.04
SIX5Q8N196 AC019176.1-201ENST00000518519 225 ntBASIC2.33□□□□□ -2.04
SIX5Q8N196 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.33□□□□□ -2.04
SIX5Q8N196 SNRPGP19-201ENST00000603826 189 ntBASIC2.33□□□□□ -2.04
SIX5Q8N196 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
SIX5Q8N196 AL627230.6-201ENST00000611129 280 ntBASIC2.33□□□□□ -2.04
SIX5Q8N196 MIR219B-201ENST00000637023 88 ntBASIC2.33□□□□□ -2.04
SIX5Q8N196 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SIX5Q8N196 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SIX5Q8N196 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SIX5Q8N196 MIR103A2-201ENST00000362154 78 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 SNORD33-201ENST00000362761 85 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 RNY1P10-201ENST00000363268 113 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 Y_RNA.226-201ENST00000364337 114 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 SNORD58A-201ENST00000383875 65 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 RNA5SP233-201ENST00000459153 113 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 RN7SL274P-201ENST00000492268 272 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 AC079140.2-201ENST00000506193 142 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 MIR3937-201ENST00000580135 106 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 SNORA4-201ENST00000584302 138 ntBASIC2.32□□□□□ -2.04
SIX5Q8N196 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
SIX5Q8N196 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
SIX5Q8N196 AL161722.3-201ENST00000605789 2983 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 MIR221-201ENST00000385135 110 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 RNU6-205P-201ENST00000390858 107 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 MIR1302-7-201ENST00000408841 72 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SIX5Q8N196 RNU7-62P-201ENST00000458856 62 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 RPS29P11-201ENST00000496507 171 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 AL133373.1-201ENST00000497098 94 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.31□□□□□ -2.04
SIX5Q8N196 AC103810.8-201ENST00000607347 118 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 SEPT14P17-201ENST00000617978 177 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 AC012676.2-201ENST00000619258 186 ntBASIC2.31□□□□□ -2.04
SIX5Q8N196 RNU6-1244P-201ENST00000363614 108 ntBASIC2.3□□□□□ -2.04
SIX5Q8N196 MT-TN-201ENST00000387400 73 ntBASIC2.3□□□□□ -2.04
SIX5Q8N196 SNORA26.9-201ENST00000391322 122 ntBASIC2.3□□□□□ -2.04
SIX5Q8N196 RNU6-1165P-201ENST00000410119 107 ntBASIC2.3□□□□□ -2.04
SIX5Q8N196 AC005908.1-201ENST00000468701 347 ntBASIC2.3□□□□□ -2.04
SIX5Q8N196 RPL30P7-201ENST00000479312 323 ntBASIC2.3□□□□□ -2.04
SIX5Q8N196 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIX5Q8N196 RNY1P2-201ENST00000364820 117 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 U8.13-201ENST00000390842 128 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX5Q8N196 RNU6-1053P-201ENST00000515930 101 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 RNU11-2P-201ENST00000516898 142 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 MIR6740-201ENST00000618268 113 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SIX5Q8N196 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
SIX5Q8N196 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms