Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 RNU6-396P-201ENST00000365369 105 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 AC244023.1-201ENST00000426884 112 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 AC113410.1-201ENST00000505029 247 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 AC242498.1-201ENST00000604134 111 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 SNORA63.5-201ENST00000363548 123 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 SNORA22-201ENST00000383907 134 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 SNORA32-201ENST00000384072 121 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-342P-201ENST00000384521 104 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-880P-201ENST00000384526 107 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 MIR759-201ENST00000390224 91 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 RNU6-205P-201ENST00000390858 107 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 RNA5SP95-201ENST00000410319 137 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 MIR1270-201ENST00000459320 83 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 RNU7-6P-201ENST00000516845 62 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
SFTPA1Q8IWL2 SNORD114-27-201ENST00000363766 70 ntBASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 RPS23P4-201ENST00000487908 423 ntBASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 MIR2115-201ENST00000516657 100 ntBASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 MIR548AE2-201ENST00000583456 67 ntBASIC1.33□□□□□ -2.2
SFTPA1Q8IWL2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
SFTPA1Q8IWL2 SNORA18-201ENST00000384416 132 ntBASIC1.32□□□□□ -2.2
SFTPA1Q8IWL2 MIR489-201ENST00000384923 84 ntBASIC1.32□□□□□ -2.2
SFTPA1Q8IWL2 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
SFTPA1Q8IWL2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.32□□□□□ -2.2
SFTPA1Q8IWL2 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
SFTPA1Q8IWL2 SNORD115-2-201ENST00000362842 82 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 SNORD115-20-201ENST00000365099 82 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 MIR548D2-201ENST00000384955 97 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 MTATP6P29-201ENST00000415057 132 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 MIR3163-201ENST00000581592 73 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 uc_338.28-201ENST00000612082 187 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 AC087741.2-201ENST00000619415 172 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 MIR1255B1-201ENST00000636325 63 ntBASIC1.31□□□□□ -2.2
SFTPA1Q8IWL2 MIR588-201ENST00000384900 83 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 RNA5SP237-201ENST00000410414 113 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 RNU4-69P-201ENST00000410677 143 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 PDCD5P2-201ENST00000507570 312 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 RNU11-2P-201ENST00000516898 142 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SFTPA1Q8IWL2 RNY4P6-201ENST00000363667 96 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 RNU6-153P-201ENST00000364422 104 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.299-201ENST00000364973 94 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 MIR4264-201ENST00000583520 66 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 SEPT14P17-201ENST00000617978 177 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 MIR6740-201ENST00000618268 113 ntBASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.85-201ENST00000363014 111 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 Y_RNA.281-201ENST00000364774 94 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 RNU6-1107P-201ENST00000364817 104 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 SNORA2B-201ENST00000384583 137 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 RNU6-613P-201ENST00000410412 108 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 RNU7-62P-201ENST00000458856 62 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 snoU13.2-201ENST00000459201 104 ntBASIC1.28□□□□□ -2.2
SFTPA1Q8IWL2 MIR450A1-201ENST00000362262 91 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 RNU6-616P-201ENST00000384353 107 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 MIR518E-201ENST00000385252 88 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 MT-TN-201ENST00000387400 73 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 RNU6-554P-201ENST00000410466 106 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 RNU6-1086P-201ENST00000410930 100 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 AC023827.1-201ENST00000569247 97 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 MIR6767-201ENST00000637302 66 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 AL589743.1-201ENST00000551932 2712 ntBASIC1.27□□□□□ -2.21
SFTPA1Q8IWL2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 U8.6-201ENST00000364939 135 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 MIR222-201ENST00000384992 110 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 SNORD77B-201ENST00000391112 67 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 RNU1-98P-201ENST00000458992 160 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 RPL39P34-201ENST00000477141 156 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 RNU7-79P-201ENST00000516082 62 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
SFTPA1Q8IWL2 uc_338.6-201ENST00000613544 171 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms