Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC096720.1-201ENST00000604441 183 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 MIR8055-201ENST00000610739 97 ntBASIC2.28□□□□□ -2.04
NPAS4Q8IUM7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 Y_RNA.96-201ENST00000363092 109 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 RNU6-787P-201ENST00000384032 107 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 RNU6-242P-201ENST00000384359 107 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 SNORD41-201ENST00000386967 70 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 AC245047.7-201ENST00000440265 293 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 AC019176.1-201ENST00000518519 225 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 MIR4251-201ENST00000635819 61 ntBASIC2.27□□□□□ -2.05
NPAS4Q8IUM7 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 MIR302D-201ENST00000362275 68 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 MIR934-201ENST00000401241 83 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 AC090844.1-201ENST00000422019 156 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 RNU7-2P-201ENST00000516096 62 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 RNA5SP458-201ENST00000516188 119 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 RNU6-86P-201ENST00000606534 107 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 MIR3202-2-201ENST00000635980 79 ntBASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NPAS4Q8IUM7 RNU6-219P-201ENST00000364728 107 ntBASIC2.25□□□□□ -2.05
NPAS4Q8IUM7 SNORD58A-201ENST00000383875 65 ntBASIC2.25□□□□□ -2.05
NPAS4Q8IUM7 MIR206-201ENST00000384872 86 ntBASIC2.25□□□□□ -2.05
NPAS4Q8IUM7 U8.15-201ENST00000390947 134 ntBASIC2.25□□□□□ -2.05
NPAS4Q8IUM7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
NPAS4Q8IUM7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NPAS4Q8IUM7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 RNU6-979P-201ENST00000383896 107 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 RNY1P4-201ENST00000384595 115 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 RNU6-813P-201ENST00000384691 107 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 AC019129.1-201ENST00000403786 261 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 RNA5SP395-201ENST00000516567 118 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 RNU6-1006P-201ENST00000516998 103 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 MIR5588-201ENST00000581890 63 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 MIR3935-201ENST00000583472 104 ntBASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NPAS4Q8IUM7 RNU6-1163P-201ENST00000364516 107 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 MIR583-201ENST00000384846 75 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 AC027119.1-201ENST00000440877 241 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 AC245517.4-201ENST00000448601 281 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 RNU7-35P-201ENST00000517174 62 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 MIR4668-201ENST00000582284 70 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 SNRPGP19-201ENST00000603826 189 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 AC103810.7-201ENST00000607821 91 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 MIR6845-201ENST00000613182 61 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 MIR8065-201ENST00000620577 100 ntBASIC2.23□□□□□ -2.05
NPAS4Q8IUM7 Y_RNA.313-201ENST00000365095 103 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 MIR34C-201ENST00000384831 77 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 RNU1-78P-201ENST00000391248 165 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 Y_RNA.620-201ENST00000411009 88 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 RNA5SP445-201ENST00000515889 115 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 RNU6-947P-201ENST00000516264 106 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 SNORD67.1-201ENST00000516618 108 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 MIR4439-201ENST00000583746 80 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 SEPT14P17-201ENST00000617978 177 ntBASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPAS4Q8IUM7 Y_RNA.140-201ENST00000363474 103 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 RNU6-1125P-201ENST00000363601 107 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.191-201ENST00000363972 113 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 RNU6-1086P-201ENST00000410930 100 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 RNU6-602P-201ENST00000411155 105 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 CYP3A52P-201ENST00000563326 91 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 AC105081.1-201ENST00000617727 106 ntBASIC2.21□□□□□ -2.06
NPAS4Q8IUM7 SNORD116-10-201ENST00000363791 102 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 RNU7-41P-201ENST00000515917 61 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 RNU7-79P-201ENST00000516082 62 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 AC025521.1-201ENST00000621624 286 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 Z97988.1-201ENST00000637697 135 ntBASIC2.2□□□□□ -2.06
NPAS4Q8IUM7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 SNORD38.1-201ENST00000363863 68 ntBASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.437-201ENST00000384113 113 ntBASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.448-201ENST00000384185 108 ntBASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 RNU6-1237P-201ENST00000384777 107 ntBASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 RPS29P28-201ENST00000446439 141 ntBASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.244-201ENST00000364484 109 ntBASIC2.18□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.611-201ENST00000410682 108 ntBASIC2.18□□□□□ -2.06
NPAS4Q8IUM7 RNU7-171P-201ENST00000459581 62 ntBASIC2.18□□□□□ -2.06
NPAS4Q8IUM7 MIR4666B-201ENST00000578142 81 ntBASIC2.18□□□□□ -2.06
NPAS4Q8IUM7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.18□□□□□ -2.06
NPAS4Q8IUM7 MIR548AO-201ENST00000579992 96 ntBASIC2.18□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 RNU6-865P-201ENST00000364772 107 ntBASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 RNU6-1321P-201ENST00000390905 107 ntBASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPAS4Q8IUM7 RNU1-17P-201ENST00000363022 152 ntBASIC2.16□□□□□ -2.06
NPAS4Q8IUM7 Y_RNA.609-201ENST00000410669 89 ntBASIC2.16□□□□□ -2.06
NPAS4Q8IUM7 RPL31P63-201ENST00000422565 375 ntBASIC2.16□□□□□ -2.06
NPAS4Q8IUM7 RNU7-137P-201ENST00000516788 62 ntBASIC2.16□□□□□ -2.06
NPAS4Q8IUM7 MIR3664-201ENST00000579074 99 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms